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50 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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MMP9
matrix metallopeptidase 9
Chromosome 20 · 20q13.12
NCBI Gene: 4318Ensembl: ENSG00000100985.8HGNC: HGNC:7176UniProt: P14780
3,163PubMed Papers
22Diseases
5Drugs
3Pathogenic Variants
FUNCTIONAL ROLE
Hub GeneProtease
RESEARCH IMPACT
Highly StudiedLandmark GeneTrending
CLINICAL
Clinical TrialsOMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
endopeptidase activitymetalloendopeptidase activityserine-type endopeptidase activityprotein bindingmetaphyseal anadysplasiadengue diseaseCrohn's diseaselung cancer
✦AI Summary

MMP9 (matrix metallopeptidase 9) is a zinc-dependent endopeptidase that plays essential roles in extracellular matrix (ECM) remodeling and cellular processes 1. The enzyme degrades various ECM components including type IV and V collagens, cleaving them into characteristic three-quarter and one-quarter fragments, while also degrading fibronectin but sparing laminin [UniProt]. MMP9 facilitates cell migration and invasion by breaking down ECM barriers, with particular importance in leukocyte migration and trophoblast invasion during pregnancy 2. In cancer biology, MMP9 promotes tumor progression through ECM remodeling that enhances invasiveness and activates cancer-associated fibroblasts 3. The enzyme contributes to inflammatory processes, with elevated levels observed in periodontal disease where it serves as a sensitive biomarker 1. MMP9 is implicated in cardiovascular pathology, participating in vascular remodeling during intracranial aneurysm formation through ROS-mediated pathways 4 and contributing to atherosclerosis development 5. Clinical significance includes its potential as a diagnostic biomarker for pancreatic cancer, particularly in advanced stages 6, and its role in transplant rejection through M2 macrophage polarization 7. Genetic polymorphisms in MMP9 are associated with increased breast cancer risk in certain populations 8.

Sources cited
1
MMP9 is a zinc-dependent endopeptidase important in ECM remodeling and serves as a biomarker for periodontal inflammation
PMID: 35163727
2
MMP9 promotes colorectal cancer progression through ECM remodeling and activation of cancer-associated fibroblasts
PMID: 39613801
3
MMP9 mediates cell invasion in human extravillous trophoblast cells and is regulated by amphiregulin
PMID: 37544354
4
MMP9 contributes to intracranial aneurysm formation through ROS-mediated pathways
PMID: 37717465
5
MMP9 gene polymorphisms are associated with atherosclerosis development
PMID: 36822563
6
MMP9 levels are elevated in pancreatic cancer and may serve as a biomarker for advanced stages
PMID: 39487843
7
MMP9 secretion by M2 macrophages contributes to transplant rejection and vascular remodeling
PMID: 38379280
8
MMP9 gene polymorphisms are associated with increased breast cancer risk in certain populations
PMID: 35156865
Disease Associationsⓘ22
metaphyseal anadysplasiaOpen Targets
0.66Moderate
dengue diseaseOpen Targets
0.48Moderate
Crohn's diseaseOpen Targets
0.39Weak
lung cancerOpen Targets
0.38Weak
lumbar disc degenerationOpen Targets
0.38Weak
gastric adenocarcinomaOpen Targets
0.36Weak
ulcerative colitisOpen Targets
0.34Weak
breast cancerOpen Targets
0.31Weak
prostate cancerOpen Targets
0.30Weak
non-small cell lung carcinomaOpen Targets
0.29Weak
Malignant Pancreatic NeoplasmOpen Targets
0.26Weak
pancreatic neoplasmOpen Targets
0.26Weak
Kaposi's sarcomaOpen Targets
0.26Weak
COVID-19Open Targets
0.24Weak
macular degenerationOpen Targets
0.24Weak
age-related macular degenerationOpen Targets
0.23Weak
fibrodysplasia ossificans progressivaOpen Targets
0.19Weak
chronic obstructive pulmonary diseaseOpen Targets
0.14Weak
rheumatoid arthritisOpen Targets
0.14Weak
esophageal squamous cell carcinomaOpen Targets
0.12Weak
Intervertebral disc diseaseUniProt
Metaphyseal anadysplasia 2UniProt
Pathogenic Variants3
NM_004994.3(MMP9):c.929del (p.Gly310fs)Likely pathogenic
Metaphyseal anadysplasia 2
★☆☆☆2021→ Residue 310
NM_004994.3(MMP9):c.151C>T (p.Arg51Cys)Likely pathogenic
Metaphyseal anadysplasia 2
★☆☆☆2021→ Residue 51
NM_004994.3(MMP9):c.987C>A (p.Cys329Ter)Pathogenic
Metaphyseal anadysplasia 2
★☆☆☆2020→ Residue 329
View on ClinVar ↗
Drug Targets5
ANDECALIXIMABPhase III
Matrix metalloproteinase 9 inhibitor
gastric adenocarcinoma
AZD-1236Phase II
Matrix metalloproteinase 12 inhibitor
chronic obstructive pulmonary disease
CTS-1027Phase II
Matrix metalloproteinase 12 inhibitor
hepatitis C virus infection
MARIMASTATPhase III
Matrix metalloproteinase 3 inhibitor
lung cancer
REBIMASTATPhase III
Matrix metalloproteinase 13 inhibitor
Kaposi's sarcoma
Related Genes
CTSSProtein interaction100%HPXProtein interaction100%LCN2Protein interaction100%MPOProtein interaction100%TIMP2Protein interaction100%SERPINE1Protein interaction100%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
10%
Liver
1%
Brain
1%
Heart
0%
Ovary
0%
Gene Interaction Network
Click a node to explore
MMP9CTSSHPXLCN2MPOTIMP2SERPINE1
PROTEIN STRUCTURE
Preparing viewer…
PDB6ESM · 1.10 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.21LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.99 [0.82–1.21]
RankingsWhere MMP9 stands among ~20K protein-coding genes
  • #20of 20,598
    Most Researched3,163 · top 1%
  • #3,881of 5,498
    Most Pathogenic Variants3
  • #12,694of 17,882
    Most Constrained (LOEUF)1.21
Genes detectedMMP9
Sources retrieved50 papers
Response time—
📄 Sources
50▼
1
The dysadherin/MMP9 axis modifies the extracellular matrix to accelerate colorectal cancer progression.
PMID: 39613801
Nat Commun · 2024
1.00
2
Prognostic values of tumoral MMP2 and MMP9 overexpression in breast cancer: a systematic review and meta-analysis.
PMID: 33568081
BMC Cancer · 2021
0.92
3
CypD induced ROS output promotes intracranial aneurysm formation and rupture by 8-OHdG/NLRP3/MMP9 pathway.
PMID: 37717465
Redox Biol · 2023
0.90
4
MMP9 Clears the Way for Metastatic Cell Penetration Across the Blood-Brain Barrier.
PMID: 37057598
Cancer Res · 2023
0.84
5
Substrate O-glycosylation actively regulates extracellular proteolysis.
PMID: 39074261
Protein Sci · 2024
0.82