HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
NOTUM
notum, palmitoleoyl-protein carboxylesterase
Chromosome 17 · 17q25.3
NCBI Gene: 147111Ensembl: ENSG00000185269.13HGNC: HGNC:27106UniProt: Q6P988
19PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
regulation of bone mineralizationbone developmentprotein bindingpalmitoleyl hydrolase activityhair colorneoplasmIsolated anophthalmia - microphthalmiamicrophthalmia
✦AI Summary

NOTUM is a carboxylesterase that serves as a critical negative regulator of Wnt signaling through depalmitoleoylation of WNT proteins, which is essential for their binding to frizzled receptors 1. In aging, NOTUM produced by Paneth cells attenuates intestinal epithelial regeneration by decreasing stemness-maintaining Wnt signaling, with high mTORC1 activity in aged Paneth cells inhibiting PPAR-α activity and increasing NOTUM expression 2. NOTUM plays a dual role in colorectal cancer progression: it initially functions as a tumor suppressor in APC-null adenomas but becomes an oncogene upon progression to adenocarcinoma with P53 loss, with these effects being Wnt-independent and mediated through differential activity on glypicans 3. APC-mutant cells exploit NOTUM secretion to gain clonal advantage over wild-type cells by suppressing their growth and driving differentiation, facilitating early cancer initiation 4. Spatially, NOTUM-expressing epithelial cells are concentrated at the boundary between normal tissue and adenomas, where they activate cancer-related pathways despite lacking morphological changes 5. Therapeutic inhibition of NOTUM shows promise for treating advanced colorectal cancer and promoting regeneration in aged tissues 23.

Sources cited
1
NOTUM depalmitoleoylates WNT proteins, which is required for their binding to frizzled receptors
PMID: 25731175
2
NOTUM produced by aged Paneth cells attenuates intestinal regeneration through decreased Wnt signaling, regulated by mTORC1-PPAR-α pathway
PMID: 31292548
3
NOTUM functions as tumor suppressor in APC-null adenomas but becomes oncogenic in P53-loss adenocarcinomas through Wnt-independent glypican activity
PMID: 37591698
4
APC-mutant cells use NOTUM secretion to outcompete wild-type cells and initiate cancer
PMID: 34079124
5
NOTUM-expressing epithelial cells are spatially concentrated at normal-adenoma boundaries and activate cancer pathways
PMID: 39642568
Disease Associationsⓘ20
hair colorOpen Targets
0.15Weak
neoplasmOpen Targets
0.09Suggestive
Isolated anophthalmia - microphthalmiaOpen Targets
0.08Suggestive
microphthalmiaOpen Targets
0.08Suggestive
gastric cancerOpen Targets
0.08Suggestive
nanophthalmiaOpen Targets
0.06Suggestive
isolated microphthalmia 7Open Targets
0.06Suggestive
nanophthalmos 2Open Targets
0.06Suggestive
Microphthalmia - ankyloblepharon - intellectual disabilityOpen Targets
0.06Suggestive
gnathodiaphyseal dysplasiaOpen Targets
0.05Suggestive
primary ovarian insufficiencyOpen Targets
0.05Suggestive
Dentin dysplasia - sclerotic bonesOpen Targets
0.05Suggestive
dentin dysplasia-sclerotic bones syndromeOpen Targets
0.05Suggestive
Intermediate osteopetrosisOpen Targets
0.05Suggestive
46,XX gonadal dysgenesisOpen Targets
0.05Suggestive
tricho-dento-osseous syndromeOpen Targets
0.05Suggestive
Testicular regression syndromeOpen Targets
0.05Suggestive
Autosomal recessive malignant osteopetrosisOpen Targets
0.05Suggestive
12q14 microdeletion syndromeOpen Targets
0.05Suggestive
Hypoplastic amelogenesis imperfectaOpen Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
WNT1Protein interaction96%WNT7BProtein interaction96%GPC3Protein interaction94%WNT2Protein interaction94%WNT5AProtein interaction94%WNT6Protein interaction94%
Tissue Expression6 tissues
Liver
100%
Lung
15%
Brain
5%
Heart
4%
Ovary
0%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
NOTUMWNT1WNT7BGPC3WNT2WNT5AWNT6
PROTEIN STRUCTURE
Preparing viewer…
PDB7BNB · 1.16 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.87LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.65 [0.49–0.87]
RankingsWhere NOTUM stands among ~20K protein-coding genes
  • #14,480of 20,598
    Most Researched19
  • #7,717of 17,882
    Most Constrained (LOEUF)0.87
Genes detectedNOTUM
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Notum produced by Paneth cells attenuates regeneration of aged intestinal epithelium.
PMID: 31292548
Nature · 2019
1.00
2
NOTUM from Apc-mutant cells biases clonal competition to initiate cancer.
PMID: 34079124
Nature · 2021
0.90
3
Multi‑layered prevention and treatment of chronic inflammation, organ fibrosis and cancer associated with canonical WNT/β‑catenin signaling activation (Review).
PMID: 29786110
Int J Mol Med · 2018
0.80
4
Phenotypic heterogeneity and plasticity in colorectal cancer metastasis.
PMID: 40393458
Cell Genom · 2025
0.70
5
PMID: 37591698
Gut · 2023
0.60