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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
NPL
N-acetylneuraminate pyruvate lyase
Chromosome 1 Β· 1q25.3
NCBI Gene: 80896Ensembl: ENSG00000135838.14HGNC: HGNC:16781UniProt: A0A087WZ70
18PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
N-acetylneuraminate catabolic processN-acetylneuraminate lyase activityidentical protein bindingprotein bindingJaundiceConductive hearing impairmentgastric cancerhypertriglyceridemia 2
✦AI Summary

NPL (N-acetylneuraminate pyruvate lyase) is a cytosolic enzyme that catalyzes the cleavage of N-acetylneuraminic acid (sialic acid) into pyruvate and N-acetylmannosamine via a Schiff base intermediate, preventing sialic acid recycling to the cell surface 1. NPL participates in the degradation pathway of N-glycolylneuraminic acid (Neu5Gc), which humans cannot synthesize but must degrade when acquired from dietary sources 1. NPL expression is widespread across tissues including liver, kidney, placenta, and peripheral blood leukocytes 2. Functionally, NPL is essential for skeletal muscle integrity and regeneration; deleterious NPL variants cause elevated free sialic acid accumulation, reduced muscle force and endurance, impaired myofiber regeneration following injury, and mitochondrial dysfunction with aberrant sialylation of key proteins 3. NPL activity increases after fasting, injury, and in muscle dystrophy contexts, establishing it as a general marker of muscle damage 3. Clinically, NPL deficiency manifests as skeletal myopathy and cardiac edema in humans and model organisms, with N-acetylmannosamine supplementation demonstrating rescue of myopathy and mitochondrial abnormalities in mouse models 3, suggesting a potential therapeutic avenue for affected patients.

Sources cited
1
NPL catalyzes cleavage of sialic acid via Schiff base intermediate and prevents sialic acid recycling; involved in Neu5Gc degradation pathway
PMID: 33895133
2
NPL splice variant expressed in liver, kidney, placenta, pancreas, spleen, thymus, ovary, small intestine, and peripheral blood leukocytes
PMID: 16147865
3
NPL deficiency causes elevated free sialic acid, reduced muscle force/endurance, impaired myofiber regeneration, mitochondrial dysfunction, and aberrant sialylation; NPL activity increases after fasting/injury; N-acetylmannosamine rescues myopathy in mouse models
PMID: 37390204
⚠Limited data available β€” This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
JaundiceOpen Targets
0.33Weak
Conductive hearing impairmentOpen Targets
0.26Weak
gastric cancerOpen Targets
0.07Suggestive
hypertriglyceridemia 2Open Targets
0.06Suggestive
familial hypercholesterolemiaOpen Targets
0.06Suggestive
autosomal dominant mitochondrial myopathy with exercise intoleranceOpen Targets
0.05Suggestive
glycogen storage disease IXdOpen Targets
0.05Suggestive
Distal myopathy, Nonaka typeOpen Targets
0.05Suggestive
Hereditary proximal myopathy with early respiratory failureOpen Targets
0.05Suggestive
myofibrillar myopathy 3Open Targets
0.05Suggestive
carnitine palmitoyl transferase II deficiency, myopathic formOpen Targets
0.05Suggestive
Combined hyperlipidemiaOpen Targets
0.05Suggestive
thyroid hormone metabolism, abnormal, 2Open Targets
0.04Suggestive
Alpha-B crystallin-related late-onset distal myopathyOpen Targets
0.04Suggestive
GNE myopathyOpen Targets
0.04Suggestive
Laing early-onset distal myopathyOpen Targets
0.04Suggestive
MYH7-related skeletal myopathyOpen Targets
0.04Suggestive
myopathy, distal, 5Open Targets
0.04Suggestive
combined oxidative phosphorylation deficiency 49Open Targets
0.04Suggestive
sitosterolemia 2Open Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
GNEProtein interaction94%NANSProtein interaction94%RENBPProtein interaction84%IDNKShared pathway50%GLT6D1Shared pathway50%LANCL3Shared pathway50%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
65%
Liver
36%
Brain
16%
Heart
13%
Ovary
6%
Gene Interaction Network
Click a node to explore
NPLGNENANSRENBPIDNKGLT6D1LANCL3
PROTEIN STRUCTURE
Preparing viewer…
PDB6ARH Β· 1.60 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.18LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.86 [0.63–1.18]
RankingsWhere NPL stands among ~20K protein-coding genes
  • #14,755of 20,598
    Most Researched18
  • #12,403of 17,882
    Most Constrained (LOEUF)1.18
Genes detectedNPL
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
The Impact of Maternal Nanoplastic and Microplastic Particle Exposure on Mammal's Offspring.
PMID: 39195272
Cells Β· 2024
1.00
2
PMID: 37390204
Sci Adv Β· 2023
0.90
3
PMID: 24049864
0.80
4
PMID: 24049863
0.70
5
PMID: 24049862
0.60