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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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NXT1
nuclear transport factor 2 like export factor 1
Chromosome 20 · 20p11.21
NCBI Gene: 29107Ensembl: ENSG00000132661.5HGNC: HGNC:15913UniProt: Q9UKK6
45PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cytosolnucleusnucleoplasmmRNA export from nucleusneurodegenerative diseasehepatocellular carcinomaurinary bladder carcinomapremature birth
✦AI Summary

NXT1 (nuclear transport factor 2 like export factor 1) is a critical component of the principal mRNA nuclear export machinery. As part of the NXF1-NXT1 heterodimeric export receptor, NXT1 mediates the nuclear export of diverse RNA species including mRNA, tRNA, U1 snRNA, and HSP70 mRNA 1. The NXF1-NXT1 complex functions by being recruited to maturing mRNPs in the nucleus, mediating their targeting and translocation through nuclear pore complexes, and facilitating release into the cytoplasm 1. NXT1 coordinates with DEAD-box helicases and the TREX-2 complex to complete mRNP remodeling prior to export 2. In disease contexts, NXT1 has emerged as clinically relevant. In hepatocellular carcinoma, elevated NXT1 expression correlates with poor prognosis and enhanced immune escape, particularly through increased regulatory T cells and altered macrophage polarization 3. NXT1 is also exploited by pathogens: SARS-CoV-2 Nsp1 directly targets the NXF1-NXT1 complex to inhibit host mRNA export, promoting viral pathogenesis 4, and influenza virus NP protein interacts with NXT1 to promote nuclear export via CRM1-dependent mechanisms 5. In cancer biology, NXT1 represents a selective therapeutic vulnerability in MYCN-amplified neuroblastoma through synthetic lethality mechanisms involving its paralog NXT2 6. These findings establish NXT1 as both a fundamental gene expression regulator and emerging therapeutic target.

Sources cited
1
NXF1-NXT1 heterodimer is the principal mRNA export receptor; mediates mRNP targeting through nuclear pore complex and release into cytoplasm
PMID: 31513326
2
NXT1 coordinates with TREX-2 complex and DDX39B/Sub2 to complete final steps of nuclear mRNP assembly
PMID: 39862860
3
High NXT1 expression in hepatocellular carcinoma associates with poor prognosis and immune escape through increased Tregs and altered macrophage polarization
PMID: 41578763
4
SARS-CoV-2 Nsp1 targets NXF1-NXT1 complex to inhibit host mRNA nuclear export and promote viral pathogenesis
PMID: 38768348
5
NXT1 binds influenza virus NP and promotes its nuclear export via CRM1-dependent pathway
PMID: 27483302
6
NXT1 is a selective lethal genetic dependency in MYCN-amplified neuroblastoma through synthetic lethality with paralog NXT2
PMID: 33883167
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.28Weak
hepatocellular carcinomaOpen Targets
0.18Weak
urinary bladder carcinomaOpen Targets
0.16Weak
premature birthOpen Targets
0.11Weak
Miyoshi myopathyOpen Targets
0.07Suggestive
liver diseaseOpen Targets
0.06Suggestive
venous thromboembolismOpen Targets
0.06Suggestive
melanomaOpen Targets
0.05Suggestive
neoplasmOpen Targets
0.04Suggestive
acute lymphoblastic leukemiaOpen Targets
0.03Suggestive
gastric cancerOpen Targets
0.03Suggestive
laryngeal squamous cell carcinomaOpen Targets
0.03Suggestive
nasopharyngeal carcinomaOpen Targets
0.03Suggestive
pachyonychia congenitaOpen Targets
0.03Suggestive
acute myeloid leukemiaOpen Targets
0.03Suggestive
urticariaOpen Targets
0.03Suggestive
myelodysplastic syndromeOpen Targets
0.03Suggestive
head and neck squamous cell carcinomaOpen Targets
0.03Suggestive
metastatic melanomaOpen Targets
0.03Suggestive
acute promyelocytic leukemiaOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
DDX39BProtein interaction100%NXF2BProtein interaction100%NUP214Protein interaction99%HNRNPUL1Protein interaction99%NUP54Protein interaction96%NUP153Protein interaction95%
Tissue Expression6 tissues
Bone Marrow
100%
Ovary
64%
Lung
58%
Brain
39%
Liver
35%
Heart
23%
Gene Interaction Network
Click a node to explore
NXT1DDX39BNXF2BNUP214HNRNPUL1NUP54NUP153
PROTEIN STRUCTURE
Preparing viewer…
PDB9I8A · 1.50 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.74LoF Tolerant
pLIⓘ
0.70Intermediate
Observed/Expected LoF0.29 [0.13–0.74]
RankingsWhere NXT1 stands among ~20K protein-coding genes
  • #9,492of 20,598
    Most Researched45
  • #5,808of 17,882
    Most Constrained (LOEUF)0.74
Genes detectedNXT1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Immune Escape-Related Gene NXT1 as a Potential Prognostic and Therapeutic Target in Hepatocellular Carcinoma.
PMID: 41578763
Turk J Gastroenterol · 2025
1.00
2
Structures and mRNP remodeling mechanism of the TREX-2 complex.
PMID: 39862860
Structure · 2025
0.90
3
Inhibition of mRNA nuclear export promotes SARS-CoV-2 pathogenesis.
PMID: 38768348
Proc Natl Acad Sci U S A · 2024
0.80
4
Mechanisms of nuclear mRNA export: A structural perspective.
PMID: 31513326
Traffic · 2019
0.70
5
Strength in Diversity: Nuclear Export of Viral RNAs.
PMID: 32932882
Viruses · 2020
0.60