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GeneE
4 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
OR3A1
olfactory receptor family 3 subfamily A member 1
Chromosome 17 Β· 17p13.3
NCBI Gene: 4994Ensembl: ENSG00000180090.6HGNC: HGNC:8282UniProt: A0A126GVP1
13PubMed Papers
6Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Receptor
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
signal transductionplasma membraneolfactory receptor activitymembranecolorectal adenocarcinomanon-small cell lung carcinomacontinuous positive airway pressurebenign neoplasm
✦AI Summary

OR3A1 is an olfactory receptor that functions as a G-protein coupled odorant receptor 1. As a member of the olfactory receptor superfamily, OR3A1 represents one of the hundreds of mammalian olfactory receptors evolved to recognize diverse odorant molecules 1. Structurally, OR3A1 contains a defined odorant binding pocket located in its transmembrane domains, with aldehydes binding near Ser257 and Thr249 in the bottom region of the binding pocket 2. The receptor exhibits selective ligand recognition, with aldehydes and alcohols competing for distinct binding regions, and can bind haloanisole compounds like 2,4,6-trichloroanisole at very low concentrations, potentially explaining their musty odor perception 2. OR3A1 is expressed in olfactory sensory neurons in the nasal cavity, where odorant binding triggers signal transduction cascades that initiate odor perception 3. Like other olfactory receptors, OR3A1 exhibits genetic variation between individuals; over 60 human OR genes, including some ORs from OR3A1's family, segregate as functional or pseudogene alleles 4. This genetic polymorphism contributes to individual differences in odor perception and odorant recognition capacity 4.

Sources cited
1
OR3A1 has a specific odorant binding pocket with aldehydes binding near Ser257 and Thr249, and can bind haloanisole compounds that produce musty odors
PMID: 27092849
2
OR3A1 is an olfactory receptor gene nomenclature example; olfactory receptors are part of the largest vertebrate gene family for recognizing diverse odorants
PMID: 11063259
3
Olfactory receptor genes are expressed in olfactory tissue neurons, with individual neurons expressing a single receptor type
PMID: 8647456
4
Human olfactory receptor genes segregate as functional or pseudogene alleles, contributing to individual variation in odor perception
PMID: 23002384
⚠Limited data available β€” This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜6
colorectal adenocarcinomaOpen Targets
0.05Suggestive
non-small cell lung carcinomaOpen Targets
0.03Suggestive
continuous positive airway pressureOpen Targets
0.03Suggestive
benign neoplasmOpen Targets
0.02Suggestive
adolescent idiopathic scoliosisOpen Targets
0.02Suggestive
diabetes mellitusOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
LOC124905359Shared pathway100%OR4M2BShared pathway100%LOC112268384Shared pathway100%OR4N4CShared pathway100%OR9G9Shared pathway100%OR2A2Shared pathway100%
Tissue Expression6 tissues
Brain
100%
Lung
0%
Bone Marrow
0%
Ovary
0%
Heart
0%
Liver
0%
Gene Interaction Network
Click a node to explore
OR3A1LOC124905359OR4M2BLOC112268384OR4N4COR9G9OR2A2
PROTEIN STRUCTURE
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AlphaFoldAI-predicted Β· UniProt P47881
View on AlphaFold β†—
RankingsWhere OR3A1 stands among ~20K protein-coding genes
  • #16,245of 20,598
    Most Researched13
Genes detectedOR3A1
Sources retrieved4 papers
Response timeβ€”
πŸ“„ Sources
4
1
Studying Haloanisoles Interaction with Olfactory Receptors.
PMID: 27092849
ACS Chem Neurosci Β· 2016
1.00
2
The olfactory receptor gene superfamily: data mining, classification, and nomenclature.
PMID: 11063259
Mamm Genome Β· 2000
0.75
3
A rapid genotyping assay for segregating human olfactory receptor pseudogenes.
PMID: 23002384
J Biomol Tech Β· 2012
0.50
4
Olfactory receptor-encoding genes and pseudogenes are expressed in humans.
PMID: 8647456
Gene Β· 1996
0.25