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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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PAIP2
poly(A) binding protein interacting protein 2
Chromosome 5 · 5q31.2
NCBI Gene: 51247Ensembl: ENSG00000120727.14HGNC: HGNC:17970UniProt: Q49AE6
49PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
negative regulation of translational initiationcytoplasmprotein bindingtranslation repressor activityneurodegenerative diseaseheart failurebody weight gainplacenta praevia
✦AI Summary

PAIP2 (poly(A) binding protein interacting protein 2) functions as a translation repressor that negatively regulates translation initiation by competing with PAIP1 for binding to PABPC1 1. PAIP2 contains two distinct binding sites for PABP, enabling formation of a trimeric complex with one PABP molecule and two PAIP2 molecules at nanomolar to micromolar affinities 1. Mechanistically, PAIP2 displaces PABPC1 from poly(A) RNA and disrupts mRNA circularization, a process critical for translation initiation 1. PAIP2 also regulates translation termination by preventing PABP-mediated activation of eRF3 at premature termination codons 2. Beyond cytoplasmic functions, PAIP2 localizes to active gene promoters in the nucleus where it is loaded onto nascent mRNA co-transcriptionally 3. Clinically, PAIP2 regulates vascular endothelial growth factor (VEGF) mRNA stability through direct 3'-UTR binding and cooperation with HuR, influencing angiogenesis 4. PAIP2 also functions as an innate antiviral factor, restricting cytomegalovirus replication by limiting translation initiation factor assembly 5. PAIP2 protein stability is controlled by the E3 ubiquitin ligase EDD in a PABPC1-dependent manner, providing homeostatic feedback 6. Pathogenic variants in PABPC1 that impair PAIP2 binding cause developmental delay and autism spectrum features, highlighting the importance of PABPC1-PAIP2 interactions in neurogenesis 7.

Sources cited
1
PAIP2 contains two PABP binding sites with dual-site interactions; forms trimeric complexes; high-affinity central region binds PABP RRM and inhibits poly(A) RNA binding
PMID: 11438674
2
PAIP1 and PAIP2 prevent translation termination by controlling PABP activity and suppressing eRF3-mediated termination at premature stop codons
PMID: 30992367
3
PAIP2 localizes to nucleus and active gene promoters; loaded onto nascent mRNA co-transcriptionally in RNA-dependent manner
PMID: 29995569
4
PAIP2 binds VEGF mRNA 3'-UTR and stabilizes VEGF mRNA; cooperates with HuR for mRNA stabilization and regulates angiogenesis
PMID: 15175342
5
PAIP2 functions as innate antiviral defense factor; restricts cytomegalovirus replication by inhibiting translation initiation factor eIF4F assembly
PMID: 23964095
6
PAIP2 protein stability is EDD-mediated ubiquitin ligase dependent; PABP levels regulate Paip2 turnover providing homeostatic feedback
PMID: 16601676
7
Pathogenic PABPC1 variants in PABP domain decrease PAIP2 binding affinity; impair neurogenesis and cause developmental delay with autism features
PMID: 35511136
8
PAIP2 interacts with testis-specific PABPC6 and translation-associated factors including EIF4G and PAIP1
PMID: 38281153
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.27Weak
heart failureOpen Targets
0.24Weak
body weight gainOpen Targets
0.21Weak
placenta praeviaOpen Targets
0.21Weak
azoospermiaOpen Targets
0.08Suggestive
breast cancerOpen Targets
0.07Suggestive
partial chromosome Y deletionOpen Targets
0.06Suggestive
congenital bilateral absence of vas deferensOpen Targets
0.06Suggestive
spermatogenic failure 71Open Targets
0.06Suggestive
spermatogenic failure 57Open Targets
0.05Suggestive
spermatogenic failure 50Open Targets
0.05Suggestive
spermatogenic failure 61Open Targets
0.05Suggestive
spermatogenic failure 62Open Targets
0.05Suggestive
spermatogenic failure 88Open Targets
0.05Suggestive
spermatogenic failure 59Open Targets
0.05Suggestive
spermatogenic failure 60Open Targets
0.05Suggestive
spermatogenic failure 73Open Targets
0.05Suggestive
spermatogenic failure 74Open Targets
0.05Suggestive
spermatogenic failure 63Open Targets
0.05Suggestive
spermatogenic failure 31Open Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
PAIP2BShared pathway100%PABPC4Protein interaction99%PAIP1Protein interaction99%PABPC1Protein interaction99%EIF4G1Protein interaction98%PABPC5Protein interaction97%
Tissue Expression6 tissues
Brain
100%
Heart
58%
Bone Marrow
42%
Ovary
27%
Lung
21%
Liver
19%
Gene Interaction Network
Click a node to explore
PAIP2PAIP2BPABPC4PAIP1PABPC1EIF4G1PABPC5
PROTEIN STRUCTURE
Preparing viewer…
PDB3KUS · 1.40 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.31LoF Tolerant
pLIⓘ
0.55Intermediate
Observed/Expected LoF0.00 [0.00–1.31]
RankingsWhere PAIP2 stands among ~20K protein-coding genes
  • #8,991of 20,598
    Most Researched49
  • #13,787of 17,882
    Most Constrained (LOEUF)1.31
Genes detectedPAIP2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Polyadenylate-binding protein-interacting proteins PAIP1 and PAIP2 affect translation termination.
PMID: 30992367
J Biol Chem · 2019
1.00
2
Paip2 is localized to active promoters and loaded onto nascent mRNA in Drosophila.
PMID: 29995569
Cell Cycle · 2018
0.90
3
Intronless Pabpc6 encodes a testis-specific, cytoplasmic poly(A)-binding protein but is dispensable for spermatogenesis in the mouse†.
PMID: 38281153
Biol Reprod · 2024
0.80
4
A new role for the cellular PABP repressor Paip2 as an innate restriction factor capable of limiting productive cytomegalovirus replication.
PMID: 23964095
Genes Dev · 2013
0.70
5
Dual interactions of the translational repressor Paip2 with poly(A) binding protein.
PMID: 11438674
Mol Cell Biol · 2001
0.60