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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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PANK2
pantothenate kinase 2
Chromosome 20 Β· 20p13
NCBI Gene: 80025Ensembl: ENSG00000125779.24HGNC: HGNC:15894UniProt: Q6P1K9
101PubMed Papers
21Diseases
0Drugs
138Pathogenic Variants
FUNCTIONAL ROLE
Kinase
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
regulation of fatty acid metabolic processregulation of triglyceride metabolic processpantothenate kinase activityprotein bindingpantothenate kinase-associated neurodegenerationhypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degenerationDystoniagenetic disorder
✦AI Summary

PANK2 encodes pantothenate kinase 2, a cytoplasmic enzyme catalyzing phosphorylation of pantothenate (vitamin B5) to 4'-phosphopantothenate, the first and rate-determining step of coenzyme A (CoA) biosynthesis 1. PANK2 is the only pantothenate kinase isoform with mitochondrial localization 1, positioning it to regulate cellular energy metabolism and lipid homeostasis. Mutations in PANK2 cause pantothenate kinase-associated neurodegeneration (PKAN), the most common form of neurodegeneration with brain iron accumulation (NBIA) 1. PKAN presents with progressive movement disorder, dystonia, dysarthria, cognitive decline, and retinitis pigmentosa, with characteristic "eye of the tiger" MRI sign in the globus pallidus reflecting iron accumulation 1. Pathogenic PANK2 mutations perturb neuronal CoA availability, disrupting metabolic balance and triggering neurodegeneration 2. Disease onset varies from early childhood (classic PKAN) to later with slower progression (atypical PKAN), occasionally with psychiatric symptoms 3. Currently only symptomatic treatment exists; deep brain stimulation improves dystonia, while pantethine supplementation and iron chelators show promise in preclinical and pilot studies 1. PANK2 mutations account for a subset of NBIA cases 4, highlighting CoA metabolism's critical role in neuronal iron homeostasis and axonal integrity.

Sources cited
1
PANK2 catalyzes the first step of CoA biosynthesis, is the only mitochondrial pantothenate kinase, mutations cause PKAN (most common NBIA), clinical presentation includes movement disorders and "eye of the tiger" sign
PMID: 22515741
2
PANK2 mutations disrupt CoA availability in neurons; mutant proteins cause morpho-functional abnormalities in zebrafish that are rescued by CoA and vitamin B5 supplementation
PMID: 30141000
3
PKAN is caused by PANK2 mutations, presents with dystonia, rigidity, dysarthria with progressive disease course; atypical PKAN has later onset and slower progression with psychiatric symptoms
PMID: 23622415
4
PANK2 mutations account for pantothenate kinase-associated neurodegeneration, one of four most common NBIA disorders
PMID: 29325618
5
PKAN is a major neurodegeneration with brain iron accumulation disorder characterized by pathological brain iron deposition in the CNS
PMID: 40603798
Disease Associationsβ“˜21
pantothenate kinase-associated neurodegenerationOpen Targets
0.85Strong
hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degenerationOpen Targets
0.72Strong
DystoniaOpen Targets
0.63Moderate
genetic disorderOpen Targets
0.50Moderate
neurodegeneration with brain iron accumulationOpen Targets
0.47Moderate
retinitis pigmentosaOpen Targets
0.44Moderate
NeurodegenerationOpen Targets
0.43Moderate
Retinal dystrophyOpen Targets
0.43Moderate
dystonic disorderOpen Targets
0.40Weak
atypical pantothenate kinase-associated neurodegenerationOpen Targets
0.37Weak
classic pantothenate kinase-associated neurodegenerationOpen Targets
0.37Weak
Cone rod dystrophyOpen Targets
0.33Weak
cone-rod dystrophyOpen Targets
0.33Weak
Rubinstein-Taybi syndromeOpen Targets
0.26Weak
Rubinstein-Taybi syndrome due to EP300 haploinsufficiencyOpen Targets
0.26Weak
optic atrophyOpen Targets
0.11Weak
Leber congenital amaurosisOpen Targets
0.11Weak
azoospermiaOpen Targets
0.11Weak
bone diseaseOpen Targets
0.10Suggestive
partial chromosome Y deletionOpen Targets
0.09Suggestive
Neurodegeneration with brain iron accumulation 1UniProt
Pathogenic Variants138
NM_001386393.1(PANK2):c.1302dup (p.Gln435fs)Pathogenic
Pigmentary pallidal degeneration
β˜…β˜…β˜†β˜†2026β†’ Residue 435
NM_001386393.1(PANK2):c.1231G>A (p.Gly411Arg)Pathogenic
Pigmentary pallidal degeneration|Inborn genetic diseases|Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration|not provided|Retinitis pigmentosa|Pigmentary pallidal degeneration;Hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration|Rubinstein-Taybi syndrome due to EP300 haploinsufficiency
β˜…β˜…β˜†β˜†2026β†’ Residue 411
NM_001386393.1(PANK2):c.460C>T (p.Arg154Trp)Pathogenic
Pigmentary pallidal degeneration|not provided
β˜…β˜…β˜†β˜†2026β†’ Residue 154
NM_001386393.1(PANK2):c.461G>A (p.Arg154Gln)Pathogenic
not provided|Pigmentary pallidal degeneration
β˜…β˜…β˜†β˜†2026β†’ Residue 154
NM_001386393.1(PANK2):c.350A>G (p.Tyr117Cys)Pathogenic
Pigmentary pallidal degeneration|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 117
NM_001386393.1(PANK2):c.1352_1371del (p.Gly451fs)Pathogenic
Pigmentary pallidal degeneration|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 451
NM_001386393.1(PANK2):c.881A>T (p.Asn294Ile)Pathogenic
Pigmentary pallidal degeneration|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 294
NM_153638.4(PANK2):c.68_69insTG (p.His24fs)Pathogenic
Pigmentary pallidal degeneration|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 24
NM_001386393.1(PANK2):c.1277A>G (p.Tyr426Cys)Pathogenic
Pigmentary pallidal degeneration
β˜…β˜…β˜†β˜†2025β†’ Residue 426
NM_001386393.1(PANK2):c.740G>C (p.Arg247Pro)Pathogenic
Pigmentary pallidal degeneration|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 247
NM_001386393.1(PANK2):c.498_499del (p.Cys166fs)Pathogenic
Pigmentary pallidal degeneration
β˜…β˜…β˜†β˜†2025β†’ Residue 166
NM_001386393.1(PANK2):c.1021C>T (p.Arg341Ter)Pathogenic
Pigmentary pallidal degeneration|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 341
NM_001386393.1(PANK2):c.1061C>G (p.Pro354Arg)Pathogenic
not provided|Pigmentary pallidal degeneration
β˜…β˜…β˜†β˜†2025β†’ Residue 354
NM_001386393.1(PANK2):c.493_494del (p.Leu165fs)Pathogenic
Pigmentary pallidal degeneration
β˜…β˜…β˜†β˜†2025β†’ Residue 165
NM_001386393.1(PANK2):c.118C>T (p.Gln40Ter)Pathogenic
Pigmentary pallidal degeneration|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 40
NM_001386393.1(PANK2):c.1090_1096del (p.Gly363_Asn364insTer)Pathogenic
Pigmentary pallidal degeneration
β˜…β˜…β˜†β˜†2025β†’ Residue 363
NM_001386393.1(PANK2):c.440_441insCT (p.Tyr148fs)Pathogenic
Pigmentary pallidal degeneration|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 148
NM_001386393.1(PANK2):c.243del (p.Ser81fs)Pathogenic
Pigmentary pallidal degeneration|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 81
NM_001386393.1(PANK2):c.755_758del (p.Tyr252fs)Pathogenic
Pigmentary pallidal degeneration|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 252
NM_001386393.1(PANK2):c.846_847del (p.Gly283_Val284insTer)Pathogenic
Pigmentary pallidal degeneration|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 283
View on ClinVar β†—
Related Genes
VNN1Protein interaction96%FTLProtein interaction91%ENPP1Protein interaction90%ENPP3Protein interaction90%DCAF17Protein interaction72%WDR45Protein interaction72%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
82%
Lung
81%
Ovary
64%
Liver
63%
Heart
55%
Gene Interaction Network
Click a node to explore
PANK2VNN1FTLENPP1ENPP3DCAF17WDR45
PROTEIN STRUCTURE
Preparing viewer…
PDB5E26 Β· 2.14 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.11LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.84 [0.65–1.11]
RankingsWhere PANK2 stands among ~20K protein-coding genes
  • #4,733of 20,598
    Most Researched101 Β· top quartile
  • #557of 5,498
    Most Pathogenic Variants138 Β· top quartile
  • #11,448of 17,882
    Most Constrained (LOEUF)1.11
Genes detectedPANK2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Neurodegeneration with brain iron accumulation.
PMID: 29325618
Handb Clin Neurol Β· 2018
1.00
2
Overexpression of Human Mutant PANK2 Proteins Affects Development and Motor Behavior of Zebrafish Embryos.
PMID: 30141000
Neuromolecular Med Β· 2019
0.90
3
Axonal dystrophies.
PMID: 23622415
Handb Clin Neurol Β· 2013
0.80
4
Neurodegeneration with Brain Iron Accumulation.
PMID: 40603798
Adv Exp Med Biol Β· 2025
0.70
5
Pantothenate kinase 4 controls skeletal muscle substrate metabolism.
PMID: 39746949
Nat Commun Β· 2025
0.60