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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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PARPBP
PARP1 binding protein
Chromosome 12 · 12q23.2
NCBI Gene: 55010Ensembl: ENSG00000185480.12HGNC: HGNC:26074UniProt: B4DT40
28PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
DNA Repair
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nucleoplasmnegative regulation of double-strand break repair via homologous recombinationchromatinprotein bindingneurodegenerative diseaseprostate carcinomasubstance abuseattention deficit hyperactivity disorder
✦AI Summary

PARPBP (PARP1 binding protein) is a DNA repair protein that suppresses inappropriate homologous recombination and maintains genomic stability by antagonizing RAD51-DNA homologous recombination structure formation [UniProt]. It binds single-strand DNA and positively regulates PARP1's poly(ADP-ribosyl)ation activity, functioning as a key component of the DNA damage response [UniProt]. Mechanistically, PARPBP expression is regulated by transcriptional factors including ETV2 in tuberous sclerosis complex-deficient cells 1, and its alternative splicing can be modulated by snoRNA SNORA70E in cancer contexts 2. PARPBP also contributes to drug resistance; KIF18b-induced PARPBP overexpression sustains oxaliplatin resistance in colorectal cancer through promoter hypomethylation 3. Clinically, elevated PARPBP expression associates with poor prognosis across multiple cancers. In lung adenocarcinoma, high PARPBP correlates with advanced pathologic stages and activates MEK/ERK signaling 4. In hepatocellular carcinoma, elevated PARPBP predicts shortened survival and is an independent prognostic factor 5. Similarly, PARPBP overexpression in nasopharyngeal cancer promotes migration and invasion via UBE2C regulation 6, and in ovarian cancer, PARPBP alternative splicing variants enhance malignant phenotypes 2. Genomic studies identify PARPBP as a lung cancer susceptibility gene in East Asian populations 7, suggesting potential therapeutic targeting.

Sources cited
1
ETV2 transcriptionally regulates PARPBP expression in Tsc2-deficient cells
PMID: 35181635
2
PARPBP is upregulated in lung adenocarcinoma, correlates with poor prognosis, and promotes cell proliferation via MEK/ERK pathway
PMID: 31611199
3
PARPBP identified as lung cancer-associated gene through non-coding regulatory analysis in Chinese population
PMID: 40783572
4
KIF18b-induced PARPBP overexpression via promoter hypomethylation enhances oxaliplatin resistance in colorectal cancer
PMID: 34508743
5
SNORA70E regulates PARPBP alternative splicing to promote ovarian cancer cell proliferation, invasion and migration
PMID: 36056690
6
High PARPBP expression is an independent predictor of poor survival in hepatocellular carcinoma
PMID: 40780543
7
PARPBP promotes cell migration and invasion in nasopharyngeal cancer through UBE2C regulation
PMID: 36576436
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.37Weak
prostate carcinomaOpen Targets
0.26Weak
attention deficit hyperactivity disorderOpen Targets
0.25Weak
substance abuseOpen Targets
0.25Weak
risk-taking behaviourOpen Targets
0.19Weak
endometriosisOpen Targets
0.11Weak
neoplasmOpen Targets
0.09Suggestive
Parkinson diseaseOpen Targets
0.09Suggestive
gastric cancerOpen Targets
0.09Suggestive
breast cancerOpen Targets
0.08Suggestive
leiomyomaOpen Targets
0.06Suggestive
hepatocellular carcinomaOpen Targets
0.06Suggestive
Alzheimer diseaseOpen Targets
0.06Suggestive
Ovarian EndometriosisOpen Targets
0.06Suggestive
Abnormality of the skeletal systemOpen Targets
0.05Suggestive
COVID-19Open Targets
0.04Suggestive
Granular Cell TumorOpen Targets
0.04Suggestive
experimental autoimmune encephalomyelitisOpen Targets
0.03Suggestive
upper respiratory tract disorderOpen Targets
0.03Suggestive
breast diseaseOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
NCAPGProtein interaction91%PMCHProtein interaction90%HMMRProtein interaction85%CDK1Protein interaction84%KIF18AProtein interaction81%CENPIProtein interaction81%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
26%
Lung
5%
Ovary
5%
Heart
3%
Liver
3%
Gene Interaction Network
Click a node to explore
PARPBPNCAPGPMCHHMMRCDK1KIF18ACENPI
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q9BZU5
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.60LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.96 [0.59–1.60]
RankingsWhere PARPBP stands among ~20K protein-coding genes
  • #12,411of 20,598
    Most Researched28
  • #15,667of 17,882
    Most Constrained (LOEUF)1.60
Genes detectedPARPBP
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
ETV2 regulates PARP-1 binding protein to induce ER stress-mediated death in tuberin-deficient cells.
PMID: 35181635
Life Sci Alliance · 2022
1.00
2
Poly (ADP-ribose) polymerase-1 Binding Protein Facilitates Lung Adenocarcinoma Cell Proliferation and Correlates with Poor Prognosis.
PMID: 31611199
Ann Clin Lab Sci · 2019
0.90
3
Non-coding genetic elements of lung cancer identified using whole genome sequencing in 13,722 Chinese.
PMID: 40783572
Nat Commun · 2025
0.80
4
KIF18b-dependent hypomethylation of PARPBP gene promoter enhances oxaliplatin resistance in colorectal cancer.
PMID: 34508743
Exp Cell Res · 2021
0.70
5
SNORA70E promotes the occurrence and development of ovarian cancer through pseudouridylation modification of RAP1B and alternative splicing of PARPBP.
PMID: 36056690
J Cell Mol Med · 2022
0.60