HomeAboutRankingsData Sources
Β© 2026 GeneE
🧬
GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
PCGF2
polycomb group ring finger 2
Chromosome 17 Β· 17q12
NCBI Gene: 7703Ensembl: ENSG00000277258.6HGNC: HGNC:12929UniProt: P35227
83PubMed Papers
1Diseases
0Drugs
3Pathogenic Variants
FUNCTIONAL ROLE
Hub GeneTranscription Factor
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
nucleusPcG protein complexnegative regulation of transcription by RNA polymerase IIPRC1 complexTurnpenny-Fry syndrome
✦AI Summary

PCGF2 (polycomb group ring finger 2) is a transcriptional repressor that functions as a core component of Polycomb Repressive Complex 1 (PRC1), which maintains gene silencing through chr17 remodeling and histone modifications 1. The protein regulates histone H2A monoubiquitination at lysine 119 (H2AK119ub1), rendering chr17 transcriptionally repressed 12. PCGF2 controls cell proliferation and differentiation by directly binding to gene promoters and regulating target gene expression, including HOXA7 in granulocytic differentiation 3 and progesterone receptor (Pgr) in ovarian folliculogenesis 2. The protein interacts with UBE2I to negatively regulate sumoylation processes, affecting protein degradation pathways 4. PCGF2 has context-dependent roles in cancer, acting as a tumor suppressor in some contexts while promoting colon cancer progression through CENPE upregulation 5. Disease relevance includes Turnpenny-Fry syndrome, caused by de novo missense mutations affecting the conserved Pro65 residue, resulting in craniofacial, neurological, cardiovascular, and skeletal abnormalities 6. These mutations likely create dominant-negative effects by disrupting histone binding capabilities while sequestering other PRC1 components 6. PCGF2 dysregulation has also been implicated in Alzheimer's disease and acute promyelocytic leukemia 73.

Sources cited
1
PCGF2 functions as a component of PRC1 complex and controls H2AK119ub1 histone modification
PMID: 32979540
2
PCGF2 regulates ovarian folliculogenesis by binding to Pgr promoter and modulating H2AK119ub1
PMID: 36407101
3
PCGF2 negatively regulates granulocytic differentiation by directly binding to HOXA7 chromatin
PMID: 22085718
4
PCGF2 interacts with UBE2I to regulate sumoylation and protein degradation pathways
PMID: 27030546
5
PCGF2 acts as oncogenic driver in colon cancer through CENPE upregulation
PMID: 39327243
6
De novo Pro65 missense mutations cause Turnpenny-Fry syndrome with dominant-negative effects
PMID: 30343942
7
PCGF2 dysregulation implicated in Alzheimer's disease
PMID: 34182925
Disease Associationsβ“˜1
Turnpenny-Fry syndromeUniProt
Pathogenic Variants3
NM_007144.3(PCGF2):c.194C>T (p.Pro65Leu)Pathogenic
Abnormality of the outer ear;Intellectual disability|Turnpenny-fry syndrome|Global developmental delay|not provided|Inborn genetic diseases|Intellectual disability
β˜…β˜…β˜†β˜†2026β†’ Residue 65
NM_007144.3(PCGF2):c.193C>T (p.Pro65Ser)Likely pathogenic
Turnpenny-fry syndrome|Inborn genetic diseases
β˜…β˜…β˜†β˜†2021β†’ Residue 65
NM_007144.3(PCGF2):c.194C>G (p.Pro65Arg)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2021β†’ Residue 65
View on ClinVar β†—
Related Genes
YAF2Protein interaction100%RING1Protein interaction100%BMI1Protein interaction100%CDC27Protein interaction100%PHC2Protein interaction100%UBAP2LProtein interaction100%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
Click a node to explore
PCGF2YAF2RING1BMI1CDC27PHC2UBAP2L
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt P35227
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.44Moderately Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.25 [0.14–0.44]
RankingsWhere PCGF2 stands among ~20K protein-coding genes
  • #5,748of 20,598
    Most Researched83
  • #4,007of 5,498
    Most Pathogenic Variants3
  • #2,435of 17,882
    Most Constrained (LOEUF)0.44 Β· top quartile
Genes detectedPCGF2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Large-scale discovery of novel genetic causes of developmental disorders.
PMID: 25533962
Nature Β· 2015
1.00
2
The plasma peptides of Alzheimer's disease.
PMID: 34182925
Clin Proteomics Β· 2021
0.90
3
Biological functions of chromobox (CBX) proteins in stem cell self-renewal, lineage-commitment, cancer and development.
PMID: 32979540
Bone Β· 2021
0.80
4
Polycomb subunit
PMID: 36407101
Front Cell Dev Biol Β· 2022
0.70
5
PCGF2 Acts as an Oncogenic Driver in Colon Cancer through the Upregulation of CENPE.
PMID: 39327243
Discov Med Β· 2024
0.60