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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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POLR1B
RNA polymerase I subunit B
Chromosome 2 · 2q14.1
NCBI Gene: 84172Ensembl: ENSG00000125630.16HGNC: HGNC:20454UniProt: B7Z1W6
104PubMed Papers
21Diseases
0Drugs
5Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
CLINICAL
OMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
fibrillar centerDNA-directed RNA polymerase activityRNA polymerase I complexprotein bindingTreacher Collins syndrome 4Treacher-Collins syndromejoint diseaseChronic Obstructive Asthma
✦AI Summary

POLR1B encodes a catalytic core component of RNA polymerase I (Pol I), a DNA-dependent RNA polymerase essential for ribosomal RNA synthesis 1. POLR1B participates in transcribing 47S pre-rRNA precursors from multicopy rRNA gene clusters, ultimately generating 5.8S, 18S, and 28S ribosomal RNAs 1. The protein functions throughout the complete Pol I transcription cycle—initiation, elongation, and termination—with POLR1B contributing to the active catalytic center by coordinating a magnesium ion and providing lysine residues that facilitate Watson-Crick base pairing during nucleotide incorporation 1. The enzyme exhibits high processivity while maintaining proofreading activity through POLR1H-mediated cleavage of misincorporated nucleotides 2. Clinically, POLR1B mutations cause Treacher Collins syndrome type 4 (TCS4), a rare autosomal dominant craniofacial disorder characterized by mandibular and malar hypoplasia 3. Pathogenic POLR1B variants induce p53-dependent apoptosis in the neuroepithelium, impairing neural crest cell migration and differentiation, as demonstrated in zebrafish models 3. Beyond craniofacial disease, POLR1B is upregulated in non-small cell lung cancer, where silencing suppresses proliferation and induces apoptosis 4. POLR1B also serves as a hub gene in colorectal and hepatocellular cancer pathways [PMID:33202381; 57], and shows differential expression in cluster headache patients 6.

Sources cited
1
POLR1B catalyzes 47S pre-rRNA transcription through the complete transcription cycle with metal ion coordination
PMID: 11250903
2
POLR1B participates in proofreading activity through POLR1H-mediated cleavage
PMID: 16809778
3
POLR1B pathogenic variants cause TCS4 through p53-dependent apoptosis affecting neural crest cell migration
PMID: 31649276
4
POLR1B is upregulated in non-small cell lung cancer and promotes cell proliferation
PMID: 31897183
5
POLR1B functions downstream in colorectal cancer tumorigenesis pathways
PMID: 33202381
6
POLR1B is a target gene in hepatocellular carcinoma signaling networks
PMID: 37650557
7
POLR1B shows differential expression in cluster headache patients
PMID: 34180076
Disease Associationsⓘ21
Treacher Collins syndrome 4Open Targets
0.75Strong
Treacher-Collins syndromeOpen Targets
0.38Weak
joint diseaseOpen Targets
0.27Weak
Chronic Obstructive AsthmaOpen Targets
0.22Weak
lower respiratory tract diseaseOpen Targets
0.13Weak
Hodgkins lymphomaOpen Targets
0.09Suggestive
colorectal carcinomaOpen Targets
0.08Suggestive
lung cancerOpen Targets
0.07Suggestive
Hypomaturation amelogenesis imperfectaOpen Targets
0.06Suggestive
Hypoplastic amelogenesis imperfectaOpen Targets
0.06Suggestive
non-small cell lung carcinomaOpen Targets
0.05Suggestive
amelogenesis imperfectaOpen Targets
0.05Suggestive
amelogenesis imperfecta type 1GOpen Targets
0.04Suggestive
OligodontiaOpen Targets
0.04Suggestive
tooth agenesisOpen Targets
0.04Suggestive
dentin dysplasia type IOpen Targets
0.04Suggestive
polycystic kidney disease 5Open Targets
0.04Suggestive
amelogenesis imperfecta, type ijOpen Targets
0.04Suggestive
dentinogenesis imperfecta type 3Open Targets
0.04Suggestive
amelogenesis imperfecta type 1AOpen Targets
0.04Suggestive
Treacher Collins syndrome 4UniProt
Pathogenic Variants5
NM_019014.6(POLR1B):c.490G>T (p.Glu164Ter)Likely pathogenic
Treacher Collins syndrome 4
★☆☆☆2024→ Residue 164
NM_019014.6(POLR1B):c.2063A>G (p.Gln688Arg)Likely pathogenic
POLR1B-related disorder
☆☆☆☆2024→ Residue 688
NM_019014.6(POLR1B):c.3007C>T (p.Arg1003Cys)Pathogenic
Treacher Collins syndrome 4|POLR1B-related disorder|Treacher Collins syndrome
☆☆☆☆2023→ Residue 1003
NM_019014.6(POLR1B):c.2046T>A (p.Ser682Arg)Pathogenic
Treacher Collins syndrome 4|Treacher Collins syndrome
☆☆☆☆2020→ Residue 682
NM_019014.6(POLR1B):c.3007C>A (p.Arg1003Ser)Pathogenic
Treacher Collins syndrome 4|Treacher Collins syndrome
☆☆☆☆2020→ Residue 1003
View on ClinVar ↗
Related Genes
CTPS1Protein interaction100%UBTFProtein interaction100%TAF1CProtein interaction100%TAF1AProtein interaction100%POLIProtein interaction100%CTPS2Protein interaction100%
Tissue Expression6 tissues
Liver
100%
Brain
86%
Bone Marrow
85%
Heart
76%
Ovary
72%
Lung
62%
Gene Interaction Network
Click a node to explore
POLR1BCTPS1UBTFTAF1CTAF1APOLICTPS2
PROTEIN STRUCTURE
Preparing viewer…
PDB7OB9 · 2.70 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.36Moderately Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.26 [0.19–0.36]
RankingsWhere POLR1B stands among ~20K protein-coding genes
  • #4,605of 20,598
    Most Researched104 · top quartile
  • #3,524of 5,498
    Most Pathogenic Variants5
  • #1,637of 17,882
    Most Constrained (LOEUF)0.36 · top 10%
Genes detectedPOLR1B
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Treacher Collins Syndrome: Genetics, Clinical Features and Management.
PMID: 34573374
Genes (Basel) · 2021
1.00
2
POLR1B and neural crest cell anomalies in Treacher Collins syndrome type 4.
PMID: 31649276
Genet Med · 2020
0.90
3
POLR1B is upregulated and promotes cell proliferation in non-small cell lung cancer.
PMID: 31897183
Oncol Lett · 2020
0.80
4
Long non-coding RNA ZFAS1 promotes colorectal cancer tumorigenesis and development through DDX21-POLR1B regulatory axis.
PMID: 33202381
Aging (Albany NY) · 2020
0.70
5
ZBTB34 is a hepatocellular carcinoma-associated protein with a monopartite nuclear localization signal.
PMID: 37650557
Aging (Albany NY) · 2023
0.60