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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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PTPRN
protein tyrosine phosphatase receptor type N
Chromosome 2 · 2q35
NCBI Gene: 5798Ensembl: ENSG00000054356.15HGNC: HGNC:9676UniProt: Q16849
66PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
ReceptorTranscription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
spectrin bindingpositive regulation of type B pancreatic cell proliferationdense core granule maturationubiquitin-like protein ligase bindingpostpartum depressionAbnormality of the skeletal systemMODYtype 1 diabetes mellitus
✦AI Summary

PTPRN (protein tyrosine phosphatase receptor type N) is a membrane receptor protein that lacks conventional protein tyrosine phosphatase activity due to mutations in its catalytic domain, but has acquired distinct roles in neuroendocrine cells 1. The protein is expressed in neuroendocrine tissues including the hypothalamus, pituitary gland, pancreas, lung, and intestine 1. In pancreatic beta-cells, PTPRN regulates insulin secretion through two mechanisms: its cytoplasmic fragment (ICA512-CCF) controls insulin granule dynamics and exocytosis, while its nuclear translocation promotes insulin gene expression by interacting with STAT5B transcription factors 1. PTPRN has significant disease relevance, particularly in cancer. In glioblastoma, high PTPRN expression correlates with poor prognosis and promotes tumor cell proliferation and migration through activation of the PI3K/AKT pathway via interaction with HSP90AA1 2. The protein has been identified as a potential therapeutic target, with several studies incorporating PTPRN into prognostic models for glioblastoma survival prediction 345. Additionally, PTPRN shows associations with diabetic kidney disease in genome-wide studies 6. These findings suggest PTPRN plays crucial roles in both normal neuroendocrine function and pathological processes.

Sources cited
1
PTPRN lacks conventional phosphatase activity due to catalytic domain mutations and is expressed in neuroendocrine tissues
PMID: 39926347
2
PTPRN regulates insulin secretion through granule dynamics and gene expression mechanisms
PMID: 39926347
3
High PTPRN expression correlates with poor prognosis in glioma and promotes proliferation/migration via PI3K/AKT pathway
PMID: 34557405
4
PTPRN is incorporated into cuproptosis-related prognostic models for glioblastoma
PMID: 36814929
5
PTPRN serves as a survival-related variable in glioblastoma prognostic indices
PMID: 39505178
6
PTPRN is overexpressed in glioblastoma subpopulations and correlates with poor survival
PMID: 29669750
7
PTPRN shows associations with diabetic kidney disease in genome-wide studies
PMID: 35763030
Disease Associationsⓘ20
postpartum depressionOpen Targets
0.28Weak
Abnormality of the skeletal systemOpen Targets
0.17Weak
MODYOpen Targets
0.11Weak
type 1 diabetes mellitusOpen Targets
0.11Weak
gliomaOpen Targets
0.08Suggestive
lung adenocarcinomaOpen Targets
0.08Suggestive
maturity-onset diabetes of the young type 2Open Targets
0.07Suggestive
maturity-onset diabetes of the young type 4Open Targets
0.07Suggestive
maturity-onset diabetes of the young type 6Open Targets
0.07Suggestive
diabetes mellitus, transient neonatal, 2Open Targets
0.07Suggestive
diabetes mellitusOpen Targets
0.06Suggestive
obesityOpen Targets
0.06Suggestive
maturity-onset diabetes of the young type 3Open Targets
0.06Suggestive
type 2 diabetes mellitusOpen Targets
0.06Suggestive
glioblastoma multiformeOpen Targets
0.06Suggestive
Hashimoto's thyroiditisOpen Targets
0.05Suggestive
autoimmune diseaseOpen Targets
0.05Suggestive
immune system diseaseOpen Targets
0.05Suggestive
type II hypersensitivity reaction diseaseOpen Targets
0.05Suggestive
maturity-onset diabetes of the young type 10Open Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
GAD2Protein interaction97%SLC30A8Protein interaction97%SLC30A10Protein interaction93%INSProtein interaction93%INSM1Protein interaction91%MAPK8IP1Protein interaction91%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
2%
Ovary
0%
Liver
0%
Lung
0%
Heart
0%
Gene Interaction Network
Click a node to explore
PTPRNGAD2SLC30A8SLC30A10INSINSM1MAPK8IP1
PROTEIN STRUCTURE
Preparing viewer…
PDB2QT7 · 1.30 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.78LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.64 [0.53–0.78]
RankingsWhere PTPRN stands among ~20K protein-coding genes
  • #7,107of 20,598
    Most Researched66
  • #6,363of 17,882
    Most Constrained (LOEUF)0.78
Genes detectedPTPRN
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Construction and validation of a cuproptosis-related prognostic model for glioblastoma.
PMID: 36814929
Front Immunol · 2023
1.00
2
Seroconversion to multiple islet autoantibodies and risk of progression to diabetes in children.
PMID: 23780460
JAMA · 2013
0.90
3
Bioinformatic analysis constructs an optimal prognostic index for survival-related variables (OPISV) based on whole-genome expression data in Glioblastoma.
PMID: 39505178
Int J Biol Macromol · 2024
0.80
4
What is known and unknown about the role of neuroendocrine genes
PMID: 39926347
Front Endocrinol (Lausanne) · 2025
0.70
5
Current Challenges and Opportunities in Treating Glioblastoma.
PMID: 29669750
Pharmacol Rev · 2018
0.60