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26 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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RAE1
ribonucleic acid export 1
Chromosome 20 · 20q13.31
NCBI Gene: 8480Ensembl: ENSG00000101146.14HGNC: HGNC:9828UniProt: P78406
186PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub GeneTransporter
RESEARCH IMPACT
Trending
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
mitotic spindle poleprotein bindingregulation of mitotic spindle organizationRNA bindinginfluenzaHIV infectionviral diseaseCOVID-19
✦AI Summary

RAE1 (ribonucleic acid export 1) is a multifunctional protein with primary roles in nucleocytoplasmic transport and mitotic regulation. As an mRNA export factor, RAE1 mediates nuclear export of poly(A)+ RNA through the nuclear pore complex 1, with evolutionary conservation demonstrated across species from yeast to humans. Beyond mRNA export, RAE1 functions in mitotic spindle checkpoint control alongside conserved checkpoint proteins, where its haploinsufficiency links to premature aging phenotypes and cellular senescence rather than malignant transformation 2. RAE1 also serves as a ligand for the activating immune receptor NKG2D, particularly expressed on dendritic cells in anti-tumor immunity 34. Clinically, RAE1 has emerged as a prognostic biomarker in hepatocellular carcinoma, where elevated expression correlates with advanced tumor stage and poor survival outcomes 5. In gastric cancer, RAE1 promotes epithelial-mesenchymal transition and metastasis through ERK/MAPK pathway activation 6. Structurally, RAE1 associates with nucleoporin complexes (Nup98, Nup205, Nup155, Nup214) and interacts with viral antagonists like SARS-CoV-2 ORF6, which disrupts nucleocytoplasmic trafficking to suppress host immune responses 7. These multifaceted functions position RAE1 as a potential therapeutic target across cancers and viral infections.

Sources cited
1
RAE1 is a functional mRNA export factor involved in poly(A)+ RNA nuclear export, conserved across species
PMID: 9370289
2
RAE1 functions in mitotic spindle checkpoint control; haploinsufficiency causes premature aging linked to cellular senescence
PMID: 16600919
3
RAE1 is expressed as an NKG2D ligand on activated dendritic cells in anti-tumor immune responses
PMID: 34479871
4
RAE1 serves as a ligand for the activating immune receptor NKG2D on NK cells and T cells
PMID: 15518340
5
RAE1 is elevated in hepatocellular carcinoma, correlates with advanced stage and poor prognosis, and associates with nucleoporin complexes
PMID: 35751040
6
RAE1 promotes gastric cancer cell migration and invasion through ERK/MAPK signaling pathway activation
PMID: 38417691
7
RAE1 interacts with SARS-CoV-2 ORF6 at the nuclear pore complex, affecting nucleocytoplasmic trafficking and host immune responses
PMID: 37738983
Disease Associationsⓘ20
influenzaOpen Targets
0.54Moderate
HIV infectionOpen Targets
0.54Moderate
viral diseaseOpen Targets
0.53Moderate
COVID-19Open Targets
0.37Weak
HistiocytosisOpen Targets
0.37Weak
gestational diabetesOpen Targets
0.19Weak
neoplasmOpen Targets
0.11Weak
breast cancerOpen Targets
0.09Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
colorectal carcinomaOpen Targets
0.08Suggestive
Miyoshi myopathyOpen Targets
0.06Suggestive
liver cancerOpen Targets
0.06Suggestive
infectionOpen Targets
0.05Suggestive
cancerOpen Targets
0.04Suggestive
multinodular goiterOpen Targets
0.04Suggestive
colorectal cancerOpen Targets
0.04Suggestive
primary biliary cirrhosisOpen Targets
0.03Suggestive
Toxic Nodular GoiterOpen Targets
0.03Suggestive
nontoxic goiterOpen Targets
0.03Suggestive
alcohol drinkingOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
THOC1Protein interaction100%NXF3Protein interaction100%NDC1Protein interaction99%SEH1LProtein interaction99%NUP35Protein interaction99%NUP205Protein interaction99%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
43%
Ovary
35%
Liver
29%
Heart
26%
Lung
24%
Gene Interaction Network
Click a node to explore
RAE1THOC1NXF3NDC1SEH1LNUP35NUP205
PROTEIN STRUCTURE
Preparing viewer…
PDB3MMY · 1.65 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.41Moderately Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.25 [0.15–0.41]
RankingsWhere RAE1 stands among ~20K protein-coding genes
  • #2,312of 20,598
    Most Researched186 · top quartile
  • #2,118of 17,882
    Most Constrained (LOEUF)0.41 · top quartile
Genes detectedRAE1
Sources retrieved26 papers
Response time—
📄 Sources
26▼
1
Low-Dose Radiotherapy Reverses Tumor Immune Desertification and Resistance to Immunotherapy.
PMID: 34479871
Cancer Discov · 2022
1.00
2
The human RAE1 gene is a functional homologue of Schizosaccharomyces pombe rae1 gene involved in nuclear export of Poly(A)+ RNA.
PMID: 9370289
Gene · 1997
0.90
3
Aging in check.
PMID: 16600919
Sci Aging Knowledge Environ · 2006
0.80
4
RAE1-armoured DC vaccine boosts NKG2D-CAR-T cells elicited anti-solid tumour treatment.
PMID: 40683483
Pharmacol Res · 2025
0.72
5
RAE1 is a prognostic biomarker and is correlated with clinicopathological characteristics of patients with hepatocellular carcinoma.
PMID: 35751040
BMC Bioinformatics · 2022
0.70