HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
RPL39
ribosomal protein L39
Chromosome X · Xq24
NCBI Gene: 6170Ensembl: ENSG00000198918.9HGNC: HGNC:10350UniProt: P62891
71PubMed Papers
20Diseases
6Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
CLINICAL
FDA Approved Target
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
innate immune response in mucosaGO:0005615structural constituent of ribosomecytoplasmic translationinfluenzaDuchenne muscular dystrophycystic fibrosisaniridia
✦AI Summary

RPL39 encodes ribosomal protein L39, a structural component of the large ribosomal subunit essential for protein synthesis 1. Beyond its canonical ribosomal function, RPL39 exhibits significant oncogenic properties across multiple cancer types. In breast cancer, RPL39 promotes tumor initiation and metastasis through nitric oxide synthase (NOS) signaling pathways 2. A gain-of-function mutation (A14V) occurs in 97.5% of metaplastic breast cancers and correlates with reduced patient survival 3. The protein's oncogenic effects are mediated through inducible NOS signaling driven by RNA editing enzyme ADAR1 3. RPL39 also promotes cancer cell proliferation, migration, and invasion in pancreatic cancer 4, gliomas 5, and affects trophoblast cell behavior in preeclampsia 6. Mechanistically, RPL39 influences cell cycle progression, apoptosis resistance, and epithelial-mesenchymal transition markers like E-cadherin 6. Recent studies reveal RPL39's role in macrophage proliferation and sex differences in pulmonary arterial hypertension 7. The protein paralog RPL39L demonstrates specialized functions in cotranslational folding of alpha-helical domains, particularly in pluripotent cells 1. These findings establish RPL39 as both a fundamental ribosomal component and a significant therapeutic target in multiple diseases.

Sources cited
1
RPL39 is a structural component of the large ribosomal subunit and RPL39L has specialized cotranslational folding functions
PMID: 39041433
2
RPL39 promotes breast cancer stem cell self-renewal, tumor initiation and metastasis through nitric oxide synthase signaling
PMID: 24876273
3
RPL39 A14V mutation occurs in 97.5% of metaplastic breast cancers and correlates with poor survival; effects mediated through iNOS and ADAR1
PMID: 28040796
4
RPL39 promotes pancreatic cancer cell proliferation and survival; knockdown induces apoptosis
PMID: 24799381
5
RPL39 is a hub gene in gliomas affecting proliferation, migration and M2 macrophage polarization
PMID: 36248799
6
RPL39 promotes trophoblast cell migration and invasion by targeting E-cadherin; downregulated in preeclampsia
PMID: 33710681
7
RPL39 affects macrophage proliferation and contributes to sex differences in pulmonary arterial hypertension
PMID: 39957991
Disease Associationsⓘ20
influenzaOpen Targets
0.46Moderate
Duchenne muscular dystrophyOpen Targets
0.46Moderate
cystic fibrosisOpen Targets
0.39Weak
aniridiaOpen Targets
0.10Suggestive
Becker muscular dystrophyOpen Targets
0.10Suggestive
non-Hodgkins lymphomaOpen Targets
0.09Suggestive
genetic disorderOpen Targets
0.09Suggestive
hepatitis B virus infectionOpen Targets
0.08Suggestive
gliomaOpen Targets
0.07Suggestive
Alport syndromeOpen Targets
0.07Suggestive
arthritisOpen Targets
0.07Suggestive
cystinosisOpen Targets
0.07Suggestive
diffuse large B-cell lymphomaOpen Targets
0.07Suggestive
Dravet syndromeOpen Targets
0.07Suggestive
epilepsyOpen Targets
0.07Suggestive
hemophilia AOpen Targets
0.07Suggestive
hemophilia BOpen Targets
0.07Suggestive
muscular dystrophyOpen Targets
0.07Suggestive
pulmonary arterial hypertensionOpen Targets
0.06Suggestive
neoplasmOpen Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Drug Targets6
ATALURENApproved
80S Ribosome modulator
Duchenne muscular dystrophy
CITATUZUMAB BOGATOXPhase I
Epithelial cell adhesion molecule binding agent
ELX-02Phase II
80S Ribosome modulator
cystic fibrosis
MT-3724Phase II
80S Ribosome inhibitor
diffuse large B-cell lymphoma
TELIMOMAB ARITOXPhase II
T-cell surface glycoprotein CD5 binding agent
hepatitis B virus infection
ZOLIMOMAB ARITOXPhase II
T-cell surface glycoprotein CD5 binding agent
arthritis
Related Genes
ABCF1Protein interaction100%NR0B1Protein interaction100%BTF3Protein interaction100%GSPT1Protein interaction100%NACAProtein interaction100%RPL10AProtein interaction100%
Tissue Expression6 tissues
Ovary
100%
Brain
61%
Lung
53%
Liver
44%
Bone Marrow
32%
Heart
11%
Gene Interaction Network
Click a node to explore
RPL39ABCF1NR0B1BTF3GSPT1NACARPL10A
PROTEIN STRUCTURE
Preparing viewer…
PDB8A3D · 1.67 Å · EM
View on RCSB ↗
RankingsWhere RPL39 stands among ~20K protein-coding genes
  • #6,673of 20,598
    Most Researched71
  • #980of 1,025
    FDA-Approved Drug Targets1
Genes detectedRPL39
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Ribosomal protein RPL39L is an efficiency factor in the cotranslational folding of a subset of proteins with alpha helical domains.
PMID: 39041433
Nucleic Acids Res · 2024
1.00
2
Targeting RPL39 and MLF2 reduces tumor initiation and metastasis in breast cancer by inhibiting nitric oxide synthase signaling.
PMID: 24876273
Proc Natl Acad Sci U S A · 2014
0.90
3
RPL39 Was Associated With Sex Differences in Pulmonary Arterial Hypertension.
PMID: 39957991
Can Respir J · 2025
0.80
4
Identification and validation of a 17-gene signature to improve the survival prediction of gliomas.
PMID: 36248799
Front Immunol · 2022
0.70
5
Downregulated ribosomal protein L39 inhibits trophoblast cell migration and invasion by targeting E-cadherin in the placenta of patients with preeclampsia.
PMID: 33710681
FASEB J · 2021
0.60