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9 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SBNO1
strawberry notch homolog 1
Chromosome 12 · 12q24.31
NCBI Gene: 55206Ensembl: ENSG00000139697.15HGNC: HGNC:22973UniProt: A3KN83
59PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Highly Constrained
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
chromatin DNA bindinghistone bindingregulation of DNA-templated transcriptionpositive regulation of neural precursor cell proliferationneurodegenerative diseaseosteoarthritis, kneespinal stenosisLow back pain
✦AI Summary

SBNO1 (strawberry notch homolog 1) is a nuclear protein critical for neural development and neuronal genome stability. During cortical development, SBNO1 is highly expressed in the cortical plate with developmental regulation persisting into postnatal stages 1. SBNO1 promotes neural stem cell proliferation through the PI3K-Akt/GSK3B/Wnt-β-catenin signaling axis and enhances secretion of small extracellular vesicles that suppress neuroinflammation by inhibiting MAPK and NF-κB pathways in microglia [UniProt]. At the molecular level, SBNO1 safeguards neuronal genome integrity by regulating YEATS4 expression; SBNO1 knockout increases genomic DNA damage and apoptosis in cortical neurons, which YEATS4 overexpression can rescue 2. SBNO1 is essential for normal neurite outgrowth—CRISPR-based knockout in cultured neurons causes delayed neurite growth, while cortical neuron-specific knockout mice show hypotrophy of axon bundles and dendrites 3. Mutations in SBNO1 are associated with neurodevelopmental disorders including schizophrenia and intellectual disability 43. Notably, SBNO1 variants show genetic-epigenetic interactions with antipsychotic drug treatment response in schizophrenia patients, supporting precision medicine approaches 5. SBNO1 expression is also altered in glioblastoma and identified as a potential biomarker in idiopathic pulmonary fibrosis 67.

Sources cited
1
SBNO1 is expressed in neuronal populations with developmental regulation of expression during postnatal brain development
PMID: 39982356
2
SBNO1 safeguards neuronal genome stability via regulation of YEATS4; deletion increases genomic DNA damage and apoptosis
PMID: 40707437
3
SBNO1 is required for normal neurite outgrowth; knockout causes delayed neurite growth and hypotrophy of axon bundles and dendrites
PMID: 36057539
4
Mutations in SBNO1 are associated with neurodevelopmental disorders including schizophrenia
PMID: 36057539
5
SBNO1 is among candidate genes in genomic regions linked with intellectual disability
PMID: 25626716
6
SBNO1 genetic-epigenetic interactions are associated with antipsychotic drug treatment response in schizophrenia
PMID: 37269009
7
SBNO2 expression is increased in glioblastoma tissue; SBNO1 and SBNO2 localize to different subcellular compartments
PMID: 36695974
8
SBNO1 is identified as a potential biomarker in idiopathic pulmonary fibrosis
PMID: 34666057
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.50Moderate
osteoarthritis, kneeOpen Targets
0.26Weak
spinal stenosisOpen Targets
0.20Weak
Low back painOpen Targets
0.20Weak
spondyloarthropathyOpen Targets
0.20Weak
ArthropathyOpen Targets
0.19Weak
joint diseaseOpen Targets
0.18Weak
osteoarthritis, hipOpen Targets
0.17Weak
metabolic syndromeOpen Targets
0.15Weak
osteoarthritisOpen Targets
0.15Weak
type 2 diabetes mellitusOpen Targets
0.13Weak
insomniaOpen Targets
0.12Weak
Familial prostate cancerOpen Targets
0.11Weak
prostate cancerOpen Targets
0.11Weak
uterine fibroidOpen Targets
0.11Weak
allergic diseaseOpen Targets
0.09Suggestive
mathematical abilityOpen Targets
0.08Suggestive
response to xenobiotic stimulusOpen Targets
0.06Suggestive
hypertensionOpen Targets
0.06Suggestive
asthmaOpen Targets
0.06Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TGFBRAP1Protein interaction81%RASGEF1AProtein interaction81%RIOX1Protein interaction80%RIOK1Protein interaction80%LRRK1Shared pathway33%PRDM15Shared pathway29%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
59%
Heart
39%
Ovary
36%
Liver
36%
Lung
33%
Gene Interaction Network
Click a node to explore
SBNO1TGFBRAP1RASGEF1ARIOX1RIOK1LRRK1PRDM15
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt A3KN83
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.18Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.11 [0.07–0.18]
RankingsWhere SBNO1 stands among ~20K protein-coding genes
  • #7,812of 20,598
    Most Researched59
  • #348of 17,882
    Most Constrained (LOEUF)0.18 · top 5%
Genes detectedSBNO1
Sources retrieved9 papers
Response time—
📄 Sources
9▼
1
Prediction of treatment response to antipsychotic drugs for precision medicine approach to schizophrenia: randomized trials and multiomics analysis.
PMID: 37269009
Mil Med Res · 2023
1.00
2
Study of Strawberry Notch homolog 1 and 2 expression in human glioblastoma.
PMID: 36695974
J Neurooncol · 2023
0.89
3
Involvement of strawberry notch homologue 1 in neurite outgrowth of cortical neurons.
PMID: 36057539
Dev Growth Differ · 2022
0.78
4
The plasma peptides of sepsis.
PMID: 32636717
Clin Proteomics · 2020
0.67
5
Strawberry notch 1 safeguards neuronal genome via regulation of Yeats4 expression.
PMID: 40707437
Cell Death Discov · 2025
0.56