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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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SCGB1D2
secretoglobin family 1D member 2
Chromosome 11 · 11q12.3
NCBI Gene: 10647Ensembl: ENSG00000124935.4HGNC: HGNC:18396UniProt: O95969
21PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
GO:0005615extracellular regionLyme diseaseSpirochaetales Infectionssebaceous of Jadassohn nevuschronic venous hypertension
✦AI Summary

SCGB1D2 (secretoglobin family 1D member 2) is a secreted protein that functions as a host defense factor and potential steroid-binding molecule. The protein demonstrates antimicrobial activity, specifically inhibiting growth of Borrelia burgdorferi both in vitro and in vivo mouse models, suggesting it protects against Lyme disease infection 1. SCGB1D2 is present in skin, sweat, and other secretions where it serves as a barrier against bacterial pathogens 1. The protein frequently co-expresses with mammaglobin A (SCGB2A2) in various tissues, forming complexes particularly in breast and gynecologic tissues 2. Expression patterns show tissue-specific regulation, with concordant expression of SCGB1D2 and mammaglobin A in breast, endometrial, ovarian, and cervical cancers 2. In cancer contexts, SCGB1D2 shows variable expression patterns - it can be overexpressed in histologically normal breast epithelium adjacent to tumors 3 and its presence correlates with tumor ulceration in melanoma 4. The protein may serve as a potential biomarker for certain cancers, though its clinical utility appears broader than initially thought for breast-specific applications 2. Genetic variants in SCGB1D2 can affect its antimicrobial function, with certain missense mutations reducing its protective efficacy against bacterial infections 1.

Sources cited
1
The protein demonstrates antimicrobial activity, specifically inhibiting growth of Borrelia burgdorferi both in vitro and in vivo mouse models, suggesting it protects against Lyme disease infection .
PMID: 38503741
2
The protein frequently co-expresses with mammaglobin A (SCGB2A2) in various tissues, forming complexes particularly in breast and gynecologic tissues .
PMID: 16603086
3
In cancer contexts, SCGB1D2 shows variable expression patterns - it can be overexpressed in histologically normal breast epithelium adjacent to tumors and its presence correlates with tumor ulceration in melanoma .
PMID: 25407308
4
In cancer contexts, SCGB1D2 shows variable expression patterns - it can be overexpressed in histologically normal breast epithelium adjacent to tumors and its presence correlates with tumor ulceration in melanoma .
PMID: 34757537
⚠Limited data available — This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
Lyme diseaseOpen Targets
0.44Moderate
Spirochaetales InfectionsOpen Targets
0.34Weak
sebaceous of Jadassohn nevusOpen Targets
0.06Suggestive
chronic venous hypertensionOpen Targets
0.05Suggestive
neoplasmOpen Targets
0.04Suggestive
rosaceaOpen Targets
0.03Suggestive
squamous cell carcinomaOpen Targets
0.03Suggestive
breast cancerOpen Targets
0.03Suggestive
psoriasisOpen Targets
0.03Suggestive
breast carcinomaOpen Targets
0.03Suggestive
Tetralogy of FallotOpen Targets
0.02Suggestive
infectionOpen Targets
0.02Suggestive
breast neoplasmOpen Targets
0.01Suggestive
Pituitary Gland AdenomaOpen Targets
0.01Suggestive
breast ductal carcinoma in situOpen Targets
0.01Suggestive
skin infectionOpen Targets
0.01Suggestive
ovarian carcinomaOpen Targets
0.01Suggestive
cancerOpen Targets
0.01Suggestive
melanomaOpen Targets
0.01Suggestive
rectal neoplasmOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
LIPBProtein interaction100%SCGB2A1Protein interaction100%LIPAProtein interaction96%SCGB2A2Protein interaction77%LIPCProtein interaction76%SCGB1D1Protein interaction72%
Tissue Expression6 tissues
Brain
100%
Liver
4%
Lung
4%
Ovary
4%
Bone Marrow
0%
Heart
0%
Gene Interaction Network
Click a node to explore
SCGB1D2LIPBSCGB2A1LIPASCGB2A2LIPCSCGB1D1
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt O95969
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.71LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.04 [0.64–1.71]
RankingsWhere SCGB1D2 stands among ~20K protein-coding genes
  • #14,004of 20,598
    Most Researched21
  • #16,129of 17,882
    Most Constrained (LOEUF)1.71
Genes detectedSCGB1D2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
SCGB1D2 inhibits growth of Borrelia burgdorferi and affects susceptibility to Lyme disease.
PMID: 38503741
Nat Commun · 2024
1.00
2
Protein expression of prognostic genes in primary melanoma and benign nevi.
PMID: 34757537
J Cancer Res Clin Oncol · 2022
0.90
3
Expression analysis of mammaglobin A (SCGB2A2) and lipophilin B (SCGB1D2) in more than 300 human tumors and matching normal tissues reveals their co-expression in gynecologic malignancies.
PMID: 16603086
BMC Cancer · 2006
0.80
4
Significance, detection and markers of disseminated breast cancer cells.
PMID: 17158753
Endocr Relat Cancer · 2006
0.70
5
Gene expression abnormalities in histologically normal breast epithelium from patients with luminal type of breast cancer.
PMID: 25407308
Mol Biol Rep · 2015
0.60