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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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SDCBP2
syndecan binding protein 2
Chromosome 20 · 20p13
NCBI Gene: 27111Ensembl: ENSG00000125775.16HGNC: HGNC:15756UniProt: Q9H190
36PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cytosolnuclear speckextracellular exosomeprotein homodimerization activitycentral nervous system infectionalcohol drinkingneoplasmcolorectal carcinoma
✦AI Summary

SDCBP2 (syndecan binding protein 2) is a phosphatidylinositol 4,5-bisphosphate (PIP2)-binding protein localized to the cytoplasm, nucleus, and plasma membrane 1. It plays roles in cell division, survival, and intracellular signaling. In cancer contexts, SDCBP2 promotes tumor progression across multiple malignancies. In lung adenocarcinoma, SDCBP2 overexpression correlates with poor prognosis and functions as a ferroptosis-related oncogene; SDCBP2 knockdown induces G0/G1 arrest, apoptosis, and reduces glutathione levels while enhancing reactive oxygen species 2. In acute myeloid leukemia, SDCBP2 is a target of the E2A transcription factor, and its downregulation suppresses proliferation and induces differentiation 3. Conversely, the SDCBP2-AS1 lncRNA (transcribed from the opposite strand) acts as a tumor suppressor in gastric cancer by binding hnRNP K to promote β-catenin degradation 4, and in ovarian and lung cancers via competing endogenous RNA mechanisms 56. Outside oncology, SDCBP2-AS1 promotes osteogenic differentiation of bone marrow mesenchymal stem cells and serves as a biomarker for postmenopausal osteoporosis through miR-361-3p regulation 7. Gene dosage imbalance from 20p13 duplications contributes to neurodevelopmental phenotypes 8.

Sources cited
1
SDCBP2 binds PIP2 and plays roles in organization of nuclear PIP2, cell division and cell survival
PMID: 15961997
2
SDCBP2 is overexpressed in lung adenocarcinoma, promotes tumor progression, and is associated with ferroptosis pathway; knockdown induces G0/G1 arrest, apoptosis, reduces GSH and increases ROS
PMID: 41409290
3
SDCBP2 is a target gene of E2A transcription factor in acute myeloid leukemia; SDCBP2 downregulation suppresses proliferation and induces differentiation
PMID: 37714445
4
SDCBP2-AS1 lncRNA binds hnRNP K and suppresses gastric cancer tumorigenesis and metastasis by promoting β-catenin degradation
PMID: 36209503
5
SDCBP2-AS1 lncRNA acts as tumor suppressor in ovarian cancer by sponging miR-100-5p to regulate EPDR1
PMID: 34218800
6
SDCBP2-AS1 lncRNA promotes lung cancer progression by competing for miR-656-3p to regulate CRIM1 and inhibit ferroptosis
PMID: 37807311
7
SDCBP2-AS1 is decreased in postmenopausal osteoporosis patients, particularly those with fractures; SDCBP2-AS1 promotes osteogenic differentiation of BMSCs via miR-361-3p regulation
PMID: 40640983
8
SDCBP2 is located in 20p13 region; gene dosage imbalance from trisomy 20p contributes to neurodevelopmental phenotypes
PMID: 38738460
Disease Associationsⓘ20
central nervous system infectionOpen Targets
0.27Weak
alcohol drinkingOpen Targets
0.21Weak
neoplasmOpen Targets
0.12Weak
colorectal carcinomaOpen Targets
0.11Weak
rheumatoid arthritisOpen Targets
0.10Suggestive
gliomaOpen Targets
0.09Suggestive
gastric cancerOpen Targets
0.09Suggestive
type 2 diabetes mellitusOpen Targets
0.09Suggestive
asthmaOpen Targets
0.09Suggestive
periodontitisOpen Targets
0.09Suggestive
allergic rhinitisOpen Targets
0.09Suggestive
esophageal squamous cell carcinomaOpen Targets
0.08Suggestive
acute myocardial infarctionOpen Targets
0.08Suggestive
lung adenocarcinomaOpen Targets
0.08Suggestive
experimental autoimmune encephalomyelitisOpen Targets
0.08Suggestive
acute myeloid leukemiaOpen Targets
0.08Suggestive
adenomaOpen Targets
0.08Suggestive
arthritisOpen Targets
0.08Suggestive
inflammatory bowel diseaseOpen Targets
0.08Suggestive
COVID-19–associated multisystem inflammatory syndrome in adultsOpen Targets
0.08Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SDC1Protein interaction92%CD9Protein interaction78%CD63Protein interaction78%CD81Protein interaction78%PDCD6IPProtein interaction78%CD6Protein interaction72%
Tissue Expression6 tissues
Liver
100%
Lung
86%
Brain
43%
Ovary
28%
Heart
17%
Bone Marrow
13%
Gene Interaction Network
Click a node to explore
SDCBP2SDC1CD9CD63CD81PDCD6IPCD6
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q9H190
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.32LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.95 [0.69–1.32]
RankingsWhere SDCBP2 stands among ~20K protein-coding genes
  • #10,858of 20,598
    Most Researched36
  • #13,892of 17,882
    Most Constrained (LOEUF)1.32
Genes detectedSDCBP2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
SDCBP-AS1 destabilizes β-catenin by regulating ubiquitination and SUMOylation of hnRNP K to suppress gastric tumorigenicity and metastasis.
PMID: 36209503
Cancer Commun (Lond) · 2022
1.00
2
Targeting SDCBP2 in acute myeloid leukemia.
PMID: 37714445
Cell Signal · 2023
0.90
3
SDCBP2 promotes tumor progression and is a novel ferroptosis-related prognostic biomarker in lung adenocarcinoma.
PMID: 41409290
Front Immunol · 2025
0.80
4
LncRNA SDCBP2-AS1 is a putative biomarker for postmenopausal osteoporosis and promotes osteogenic differentiation of BMSCs by regulating miR-361-3p.
PMID: 40640983
Hereditas · 2025
0.70
5
The plasma peptides of sepsis.
PMID: 32636717
Clin Proteomics · 2020
0.60