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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SGPP1
sphingosine-1-phosphate phosphatase 1
Chromosome 14 · 14q23.2
NCBI Gene: 81537Ensembl: ENSG00000126821.9HGNC: HGNC:17720UniProt: Q9BX95
38PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
ER to Golgi ceramide transportnucleoplasmsphingosine-1-phosphate phosphatase activityregulation of epidermis development
✦AI Summary

SGPP1 (sphingosine-1-phosphate phosphatase 1) is a key enzyme that specifically dephosphorylates sphingosine-1-phosphate (S1P) to sphingosine, playing a critical role in sphingolipid metabolism and cellular homeostasis 1. The enzyme regulates the sphingolipid rheostat by controlling the balance between pro-apoptotic sphingosine and pro-survival S1P 2. Mechanistically, SGPP1 enables efficient recycling of sphingosine into ceramide synthesis pathways and modulates intracellular S1P levels that influence diverse cellular processes including apoptosis, lipid droplet formation, and stress responses 1. The enzyme demonstrates significant disease relevance across multiple pathologies. In cancer, SGPP1 functions as a tumor suppressor - its downregulation is associated with increased cell migration, invasion, and poor prognosis in gastric cancer 3 and colorectal cancer 4. Several microRNAs including miR-27a, miR-656-3p, and miR-133b target SGPP1, linking its expression to cancer progression 456. In metabolic disease, SGPP1 overexpression protects pancreatic beta-cells from lipotoxicity by enhancing lipid storage capacity and preventing oxidative stress 1. Clinically, SGPP1 expression serves as an independent prognostic factor for cancer survival and represents a potential therapeutic target for metabolic disorders and cancer treatment 35.

Sources cited
1
SGPP1 specifically dephosphorylates S1P to sphingosine and regulates lipid droplet formation and lipotoxicity in pancreatic beta-cells
PMID: 38950680
2
SGPP1 regulates the sphingolipid rheostat and is involved in glucocorticoid resistance in lymphomagenesis
PMID: 27869314
3
SGPP1 downregulation is associated with increased migration, invasion, and poor prognosis in gastric cancer
PMID: 26239167
4
SGPP1 is targeted by miR-27a and functions as a tumor suppressor in colorectal cancer
PMID: 25166914
5
miR-656-3p targets SGPP1 and regulates colorectal cancer cell migration, invasion, and chemo-resistance
PMID: 35081855
6
SGPP1 is a target gene of miR-133b in coronary artery disease
PMID: 36197604
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SPHK2Protein interaction99%SGPL1Protein interaction99%SPHK1Protein interaction98%SGMS2Protein interaction96%SGMS1Protein interaction96%CERS6Protein interaction95%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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SGPP1SPHK2SGPL1SPHK1SGMS2SGMS1CERS6
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q9BX95
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.13LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.75 [0.52–1.13]
RankingsWhere SGPP1 stands among ~20K protein-coding genes
  • #10,542of 20,598
    Most Researched38
  • #11,703of 17,882
    Most Constrained (LOEUF)1.13
Genes detectedSGPP1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Lipid metabolism-related genes are involved in the occurrence of asthma and regulate the immune microenvironment.
PMID: 38297226
BMC Genomics · 2024
1.00
2
Functional Association of miR-133b and miR-21 Through Novel Gene Targets ATG5, LRP6 and SGPP1 in Coronary Artery Disease.
PMID: 36197604
Mol Diagn Ther · 2022
0.90
3
The fate of intracellular S1P regulates lipid droplet turnover and lipotoxicity in pancreatic beta-cells.
PMID: 38950680
J Lipid Res · 2024
0.80
4
Inhibition of sphingosine-1-phosphate phosphatase 1 promotes cancer cells migration in gastric cancer: Clinical implications.
PMID: 26239167
Oncol Rep · 2015
0.70
5
Tumor suppressor microRNA-27a in colorectal carcinogenesis and progression by targeting SGPP1 and Smad2.
PMID: 25166914
PLoS One · 2014
0.60