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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SLC13A2
solute carrier family 13 member 2
Chromosome 17 · 17q11.2
NCBI Gene: 9058Ensembl: ENSG00000007216.16HGNC: HGNC:10917UniProt: J3QL78
33PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingfumarate transmembrane transporter activityalpha-ketoglutarate transmembrane transporter activitysuccinate transmembrane transporter activitycataractneoplasmesophageal squamous cell carcinomauridine-cytidineuria
✦AI Summary

SLC13A2 (NaDC1) is a low-affinity sodium-dicarboxylate cotransporter that mediates cellular uptake of tricarboxylic acid (TCA) cycle intermediates, including succinate, citrate, fumarate, and alpha-ketoglutarate, primarily in the small intestine and renal proximal tubule 123. The transporter operates via a 3 Na⁺:1 divalent anion stoichiometry, creating an electrogenic process, with citrate transported in its protonated divalent form 14. Mechanistically, SLC13A2 promotes hepatocyte citrate import, which serves as a precursor for ACLY-dependent acetyl-CoA formation and de novo cholesterol biosynthesis 5. In the kidney, apical SLC13A2 expression throughout the proximal tubule is critical for dicarboxylate reabsorption, acid-base homeostasis, and calcium nephrolithiasis prevention 6. SLC13A2 deficiency impairs intestinal succinate uptake, attenuating glucose tolerance improvements from dietary β-glucan 7. Clinically, SLC13A2 dysfunction associates with hypocitraturia and recurrent calcium oxalate kidney stone formation, with epistatic interaction involving VDR polymorphisms 8. SLC13A2 represents a potential therapeutic target for metabolic disorders including obesity, diabetes, and fatty liver disease 9. In gastric cancer, elevated SLC13A2 expression correlates with improved prognosis 10.

Sources cited
1
Mechanistically, SLC13A2 promotes hepatocyte citrate import, which serves as a precursor for ACLY-dependent acetyl-CoA formation and de novo cholesterol biosynthesis .
PMID: 39824985
2
In the kidney, apical SLC13A2 expression throughout the proximal tubule is critical for dicarboxylate reabsorption, acid-base homeostasis, and calcium nephrolithiasis prevention .
PMID: 27927654
3
SLC13A2 deficiency impairs intestinal succinate uptake, attenuating glucose tolerance improvements from dietary β-glucan .
PMID: 39349520
4
Clinically, SLC13A2 dysfunction associates with hypocitraturia and recurrent calcium oxalate kidney stone formation, with epistatic interaction involving VDR polymorphisms .
PMID: 27639591
5
SLC13A2 represents a potential therapeutic target for metabolic disorders including obesity, diabetes, and fatty liver disease .
PMID: 36495372
6
In gastric cancer, elevated SLC13A2 expression correlates with improved prognosis .
PMID: 36168087
Disease Associationsⓘ20
cataractOpen Targets
0.09Suggestive
neoplasmOpen Targets
0.09Suggestive
esophageal squamous cell carcinomaOpen Targets
0.07Suggestive
uridine-cytidineuriaOpen Targets
0.07Suggestive
isolated sedoheptulokinase deficiencyOpen Targets
0.07Suggestive
pentosuriaOpen Targets
0.07Suggestive
focal segmental glomerulosclerosisOpen Targets
0.07Suggestive
nephrotic syndromeOpen Targets
0.07Suggestive
familial idiopathic steroid-resistant nephrotic syndromeOpen Targets
0.06Suggestive
Seizures - intellectual disability due to hydroxylysinuriaOpen Targets
0.06Suggestive
seizures-intellectual disability due to hydroxylysinuria syndromeOpen Targets
0.06Suggestive
primary hyperoxaluria type 3Open Targets
0.06Suggestive
carnosinemiaOpen Targets
0.06Suggestive
iminoglycinuriaOpen Targets
0.06Suggestive
phosphohydroxylysinuriaOpen Targets
0.06Suggestive
hyperdibasic aminoaciduria type 1Open Targets
0.06Suggestive
beta-aminoisobutyric acid, urinary excretion ofOpen Targets
0.06Suggestive
cystathioninuriaOpen Targets
0.06Suggestive
clear cell renal carcinomaOpen Targets
0.05Suggestive
gastric cancerOpen Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SLC13A5Shared pathway100%SLC26A2Protein interaction87%SLC26A6Protein interaction79%SLC26A3Protein interaction76%SLC15A5Protein interaction73%SLC13A3Shared pathway42%
Tissue Expression6 tissues
Liver
100%
Bone Marrow
3%
Lung
3%
Brain
1%
Ovary
0%
Heart
0%
Gene Interaction Network
Click a node to explore
SLC13A2SLC13A5SLC26A2SLC26A6SLC26A3SLC15A5SLC13A3
PROTEIN STRUCTURE
Preparing viewer…
PDB8W6D · 2.50 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.86LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.66 [0.51–0.86]
RankingsWhere SLC13A2 stands among ~20K protein-coding genes
  • #11,409of 20,598
    Most Researched33
  • #7,538of 17,882
    Most Constrained (LOEUF)0.86
Genes detectedSLC13A2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
SLC13A2 promotes hepatocyte metabolic remodeling and liver regeneration by enhancing de novo cholesterol biosynthesis.
PMID: 39824985
EMBO J · 2025
1.00
2
Sodium-sulfate/carboxylate cotransporters (SLC13).
PMID: 23177988
Curr Top Membr · 2012
0.90
3
Expression of sodium-dependent dicarboxylate transporter 1 (NaDC1/SLC13A2) in normal and neoplastic human kidney.
PMID: 27927654
Am J Physiol Renal Physiol · 2017
0.80
4
Role of sodium dependent SLC13 transporter inhibitors in various metabolic disorders.
PMID: 36495372
Mol Cell Biochem · 2023
0.70
5
Barley β-glucan consumption improves glucose tolerance by increasing intestinal succinate concentrations.
PMID: 39349520
NPJ Sci Food · 2024
0.60