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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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SLC22A16
solute carrier family 22 member 16
Chromosome 6 · 6q21|6q21-q22.1
NCBI Gene: 85413Ensembl: ENSG00000004809.15HGNC: HGNC:20302UniProt: A0A0K0K1K9
30PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
organic cation transportcarnitine transportamine transmembrane transporter activitycarnitine transmembrane transporter activitymelanomacardiomyopathycervical carcinomaulcerative colitis
✦AI Summary

SLC22A16 (CT2) is a facilitative organic cation transporter that mediates bidirectional, partially sodium-dependent transport of carnitine and the polyamine spermidine 12. In testicular tissue, SLC22A16 facilitates carnitine secretion from epididymal epithelium into the lumen, supporting spermatozoa maturation 1. The transporter also functions in drug transport, serving as an adriamycin importer 3 and influencing doxorubicin pharmacokinetics in cancer patients 4. Recent evidence demonstrates SLC22A16's role in maintaining carnitine and acyl-carnitine pools in aging red blood cells, where genetic variants (rs12210538) affect lipid damage repair and hemolysis 5. In leukemia stem cells, SLC22A16-mediated drug endocytosis contributes to chemotherapy-induced senescence when PSMB10 is inhibited, offering a potential therapeutic strategy for overcoming drug resistance 6. SLC22A16 genetic polymorphisms exhibit interethnic variation and influence doxorubicin exposure in breast cancer patients, though associations with chemotherapy toxicity remain inconclusive 47. The transporter can be functionally expressed in bacterial systems for biochemical characterization 8. Mutations in SLC22A16 and related carnitine transporters cause primary carnitine deficiency with pathological effects on muscle and brain function 9.

Sources cited
1
SLC22A16 mediates bidirectional, partially Na+-dependent carnitine transport and facilitates carnitine secretion from testis epididymal epithelium
PMID: 12089149
2
SLC22A16 mediates transport of spermidine
PMID: 20037140
3
SLC22A16 is an organic cation transporter responsible for adriamycin uptake; highly expressed in ovarian clear-cell adenocarcinoma
PMID: 17581421
4
SLC22A16 polymorphisms influence doxorubicin and doxorubicinol pharmacokinetics in Asian breast cancer patients
PMID: 17559346
5
SLC22A16 genetic variants affect carnitine pools in red blood cells and influence age-dependent lipid damage repair and hemolysis
PMID: 38513237
6
SLC22A16-mediated drug endocytosis contributes to chemotherapy-induced senescence in leukemia stem cells
PMID: 40462177
7
SLC22A16 can be functionally expressed and reconstituted in proteoliposomes for biochemical studies
PMID: 35608746
8
Mutations in carnitine transporters including SLC22A16 cause primary carnitine deficiency affecting muscle and brain function
PMID: 28132459
9
SLC22A16 polymorphism rs12210538 shows trending association with doxorubicin-induced febrile neutropenia in breast cancer patients
PMID: 28036387
Disease Associationsⓘ20
melanomaOpen Targets
0.36Weak
cardiomyopathyOpen Targets
0.29Weak
cervical carcinomaOpen Targets
0.29Weak
ulcerative colitisOpen Targets
0.26Weak
endocrine system diseaseOpen Targets
0.17Weak
abscessOpen Targets
0.12Weak
self-injurious ideationOpen Targets
0.12Weak
ovarian dysfunctionOpen Targets
0.10Suggestive
cellulitisOpen Targets
0.08Suggestive
diffuse large B-cell lymphomaOpen Targets
0.06Suggestive
acute myeloid leukemiaOpen Targets
0.04Suggestive
neural tube defectOpen Targets
0.04Suggestive
cancerOpen Targets
0.04Suggestive
acute promyelocytic leukemiaOpen Targets
0.03Suggestive
gastric cancerOpen Targets
0.03Suggestive
schwannomaOpen Targets
0.03Suggestive
hepatocellular carcinomaOpen Targets
0.02Suggestive
schizophreniaOpen Targets
0.02Suggestive
esophageal squamous cell carcinomaOpen Targets
0.02Suggestive
bile duct disorderOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ACSM1Protein interaction79%SLC22A5Shared pathway27%SLC67A1Shared pathway25%SLC47A2Shared pathway25%SLC25A20Shared pathway25%AKAP4Shared pathway22%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
1%
Brain
0%
Liver
0%
Ovary
0%
Heart
0%
Gene Interaction Network
Click a node to explore
SLC22A16ACSM1SLC22A5SLC67A1SLC47A2SLC25A20AKAP4
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q86VW1
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.27LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.00 [0.80–1.27]
RankingsWhere SLC22A16 stands among ~20K protein-coding genes
  • #12,039of 20,598
    Most Researched30
  • #13,415of 17,882
    Most Constrained (LOEUF)1.27
Genes detectedSLC22A16
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Association of ABCB1 and SLC22A16 Gene Polymorphisms with Incidence of Doxorubicin-Induced Febrile Neutropenia: A Survey of Iranian Breast Cancer Patients.
PMID: 28036387
PLoS One · 2016
1.00
2
Polyamines and membrane transporters.
PMID: 23851697
Amino Acids · 2014
0.90
3
PSMB10 maintains the stemness of chemotherapeutic drug-resistant leukemia cells by inhibiting senescence and cytotoxic T lymphocyte-mediated killing in a ubiquitinated degradation manner.
PMID: 40462177
J Exp Clin Cancer Res · 2025
0.80
4
Genetic regulation of carnitine metabolism controls lipid damage repair and aging RBC hemolysis in vivo and in vitro.
PMID: 38513237
Blood · 2024
0.70
5
[Carnitine - mitochondria and beyond].
PMID: 28132459
Postepy Biochem · 2016
0.60