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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SLC47A2
solute carrier family 47 member 2
Chromosome 17 · 17p11.2
NCBI Gene: 146802Ensembl: ENSG00000180638.20HGNC: HGNC:26439UniProt: Q86VL8
33PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
plasma membranepolyspecific organic cation:proton antiporter activityorganic cation transportantiporter activityblood coagulation diseaseclear cell renal carcinomacentral nervous system cancerhypoparathyroidism, familial isolated, 2
✦AI Summary

SLC47A2 encodes MATE2-K (multidrug and toxin extrusion protein 2-K), an organic cation efflux transporter expressed primarily in the kidney 1. The protein functions as a polyspecific organic cation:proton antiporter localized to the plasma membrane, mediating secretion of endogenous and exogenous compounds in proximal tubules 2. SLC47A2 shows high amino acid sequence identity (92-97%) with human orthologs across species and exhibits kidney-predominant expression alongside other tissues including seminal vesicles 34. Clinically, SLC47A2 has been investigated for its role in metformin pharmacokinetics in type 2 diabetes. However, multiple studies found that common SLC47A2 polymorphisms (rs12943590, rs35263947, rs9900497) showed no significant association with glycemic response to metformin, dose requirements, or adverse effects in diverse populations 56. One polymorphism (rs12943590) demonstrated population-specific variation, with Huichol Native Americans showing high frequencies of a risk genotype potentially associated with decreased metformin response 1. The SLC47A2 c.-130G>A polymorphism may modestly affect serum creatinine dynamics in proximal tubule function 7. In renal cell carcinoma, SLC47A2 downregulation has been associated with poor prognosis and is regulated by a novel lncRNA (SANT1) controlling its transcriptional expression 2. DNA methylation at SLC47A2 was suggestively associated with psychotherapy response in anxiety disorders 8.

Sources cited
1
SLC47A2 encodes MATE2-K, an efflux transporter of organic cations expressed mainly in kidney; genetic variants show population-specific frequencies affecting metformin response
PMID: 34383246
2
SLC47A2 mediates secretion of endogenous and exogenous compounds; downregulated in renal cell carcinoma; regulated by lncRNA SANT1 through SFPQ/E2F1/HDAC1 complex modulation
PMID: 30951404
3
SLC47A2 has 92-97% amino acid sequence identity with human ortholog; predominantly expressed in kidney; phylogenetically clustered with human orthologs
PMID: 35081498
4
SLC47A2 expressed in seminal vesicles with age-dependent expression patterns
PMID: 35456310
5
SLC47A2 polymorphism rs12943590 showed no significant association with metformin glycemic response, dose requirements, or adverse effects
PMID: 30433870
6
SLC47A2 rs12943590 polymorphism showed no significant association with metformin response in type 2 diabetes patients
PMID: 39086121
7
SLC47A2 c.-130G>A polymorphism may affect creatinine dynamics in proximal tubules with modest contribution to serum creatinine variation
PMID: 36594679
8
SLC47A2 DNA methylation suggestively associated with psychotherapy response in anxiety disorder treatment
PMID: 40281224
Disease Associationsⓘ20
blood coagulation diseaseOpen Targets
0.08Suggestive
clear cell renal carcinomaOpen Targets
0.05Suggestive
central nervous system cancerOpen Targets
0.04Suggestive
hypoparathyroidism, familial isolated, 2Open Targets
0.04Suggestive
autosomal recessive hypophosphatemic ricketsOpen Targets
0.04Suggestive
osteoporosisOpen Targets
0.04Suggestive
postmenopausal osteoporosisOpen Targets
0.04Suggestive
carbamoyl phosphate synthetase I deficiency diseaseOpen Targets
0.03Suggestive
melorheostosisOpen Targets
0.03Suggestive
histidinemiaOpen Targets
0.03Suggestive
hypermetabolism due to uncoupled mitochondrial oxidative phosphorylation 2Open Targets
0.03Suggestive
hyperostosis corticalis generalisataOpen Targets
0.03Suggestive
pyknoachondrogenesisOpen Targets
0.03Suggestive
type 2 diabetes mellitusOpen Targets
0.03Suggestive
pseudohypoparathyroidism type 2Open Targets
0.03Suggestive
renal cell carcinomaOpen Targets
0.02Suggestive
COVID-19Open Targets
0.02Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.02Suggestive
cancerOpen Targets
0.01Suggestive
dysplasiaOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SLC22A2Protein interaction89%SLC22A11Protein interaction77%SLC22A9Protein interaction77%SLC22A6Protein interaction76%SLCO1B3Protein interaction76%SLC29A4Protein interaction72%
Tissue Expression6 tissues
Brain
100%
Liver
41%
Heart
35%
Ovary
28%
Lung
16%
Bone Marrow
2%
Gene Interaction Network
Click a node to explore
SLC47A2SLC22A2SLC22A11SLC22A9SLC22A6SLCO1B3SLC29A4
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q86VL8
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.98LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.78 [0.62–0.98]
RankingsWhere SLC47A2 stands among ~20K protein-coding genes
  • #11,416of 20,598
    Most Researched33
  • #9,331of 17,882
    Most Constrained (LOEUF)0.98
Genes detectedSLC47A2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Lack of effect of the SLC47A1 and SLC47A2 gene polymorphisms on the glycemic response to metformin in type 2 diabetes mellitus patients.
PMID: 30433870
Drug Metab Pers Ther · 2018
1.00
2
Population diversity of three variants of the SLC47A2 gene (MATE2-K transporter) in Mexican Mestizos and Native Americans.
PMID: 34383246
Mol Biol Rep · 2021
0.90
3
Systematic identification and characterization of cynomolgus macaque solute carrier transporters.
PMID: 35081498
Drug Metab Pharmacokinet · 2022
0.80
4
Epigenetic markers of disease risk and psychotherapy response in anxiety disorders - a longitudinal analysis of the DNA methylome.
PMID: 40281224
Mol Psychiatry · 2025
0.70
5
Impact of solute carrier transporter gene polymorphisms on serum creatinine concentrations in healthy volunteers.
PMID: 36594679
Pharmacol Res Perspect · 2023
0.60