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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SLC26A9
solute carrier family 26 member 9
Chromosome 1 · 1q32.1
NCBI Gene: 115019Ensembl: ENSG00000174502.20HGNC: HGNC:14469UniProt: B3KXK1
44PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
endoplasmic reticulum membraneplasma membraneendosome membranecell surfacecystic fibrosistype 2 diabetes mellituscystic fibrosis associated meconium ileuschronic kidney disease
✦AI Summary

SLC26A9 is a multifunctional anion transporter that operates as both an ion channel and anion exchanger 1. Its primary function is chloride channel activity, mediating anion transport through an alternate-access mechanism with a saturable binding site 23. SLC26A9 also functions as a chloride/bicarbonate antiporter in a DIDS- and thiosulfate-sensitive manner 41. In airway epithelia, SLC26A9 is constitutively active and localizes to the apical membrane of ciliated cells, contributing to basal chloride secretion alongside CFTR 56. SLC26A9 physically interacts with and enhances CFTR activity and expression in bronchial epithelial cells 7. Genome-wide association studies identify SLC26A9 as a significant genetic modifier of cystic fibrosis disease severity, making it a potential therapeutic target for CF lung disease 8. In renal systems, SLC26A9 participates in bicarbonate secretion synergistically with CFTR and pendrin 9. Beyond ion transport, SLC26A9 upregulation is associated with breast cancer progression through PI3K/AKT pathway activation 10. Expression patterns and functional contributions remain incompletely characterized, particularly regarding tissue-specific localization and optimal pharmacological targeting strategies.

Sources cited
1
SLC26A9 functions as both ion channel and anion exchanger
PMID: 15800055
2
SLC26A9 acts as chloride channel with alternate-access mechanism
PMID: 17673510
3
SLC26A9 mediates saturable chloride transport
PMID: 26801567
4
SLC26A9 functions as DIDS-sensitive anion exchanger
PMID: 11834742
5
SLC26A9 is primary source of constitutive anion secretion in bronchial epithelia
PMID: 34668421
6
SLC26A9 localizes to apical membrane of ciliated airway cells
PMID: 35328418
7
SLC26A9 stimulates CFTR expression and activity
PMID: 20658517
8
SLC26A9 emerges as therapeutic target for cystic fibrosis
PMID: 35204703
9
SLC26A9 participates in renal bicarbonate secretion with CFTR and pendrin
PMID: 37686084
10
SLC26A9 promotes breast cancer through PI3K/AKT signaling
PMID: 39880129
Disease Associationsⓘ20
cystic fibrosisOpen Targets
0.46Moderate
type 2 diabetes mellitusOpen Targets
0.32Weak
cystic fibrosis associated meconium ileusOpen Targets
0.32Weak
chronic kidney diseaseOpen Targets
0.32Weak
gastric cancerOpen Targets
0.08Suggestive
colorectal carcinomaOpen Targets
0.07Suggestive
Fuchs endothelial corneal dystrophyOpen Targets
0.07Suggestive
X-linked endothelial corneal dystrophyOpen Targets
0.06Suggestive
granular corneal dystrophy type IOpen Targets
0.05Suggestive
Familial ocular anterior segment mesenchymal dysgenesisOpen Targets
0.05Suggestive
congenital hereditary endothelial dystrophy of corneaOpen Targets
0.05Suggestive
lattice corneal dystrophy type IOpen Targets
0.05Suggestive
Cataract-microcornea syndromeOpen Targets
0.05Suggestive
X-linked corneal dermoidOpen Targets
0.05Suggestive
Peters anomalyOpen Targets
0.05Suggestive
autosomal dominant keratitisOpen Targets
0.05Suggestive
posterior polymorphous corneal dystrophyOpen Targets
0.05Suggestive
Thiel-Behnke corneal dystrophyOpen Targets
0.05Suggestive
macular corneal dystrophyOpen Targets
0.05Suggestive
gastric mucosal hypertrophyOpen Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CFTRProtein interaction91%SLC26A8Shared pathway67%SLC26A1Shared pathway57%SLC26A11Shared pathway43%SLC26A3Shared pathway40%SLC26A2Shared pathway38%
Tissue Expression6 tissues
Heart
100%
Lung
44%
Brain
14%
Ovary
0%
Liver
0%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
SLC26A9CFTRSLC26A8SLC26A1SLC26A11SLC26A3SLC26A2
PROTEIN STRUCTURE
Preparing viewer…
PDB7CH1 · 2.60 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.64LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.50 [0.40–0.64]
RankingsWhere SLC26A9 stands among ~20K protein-coding genes
  • #9,652of 20,598
    Most Researched44
  • #4,625of 17,882
    Most Constrained (LOEUF)0.64
Genes detectedSLC26A9
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Pathogenic Relationships in Cystic Fibrosis and Renal Diseases: CFTR, SLC26A9 and Anoctamins.
PMID: 37686084
Int J Mol Sci · 2023
1.00
2
SLC26A9 as a Potential Modifier and Therapeutic Target in Cystic Fibrosis Lung Disease.
PMID: 35204703
Biomolecules · 2022
0.90
3
Separating the contributions of SLC26A9 and CFTR to anion secretion in primary human bronchial epithelia.
PMID: 34668421
Am J Physiol Lung Cell Mol Physiol · 2021
0.80
4
SLC26A9 stimulates CFTR expression and function in human bronchial cell lines.
PMID: 20658517
J Cell Physiol · 2011
0.70
5
Identification of single nucleotide variants in SLC26A9 gene in patients with cystic fibrosis (p.Phe508del homozygous) and its association to Orkambi® (Lumacaftor and Ivacaftor) response in vitro.
PMID: 37068695
Gene · 2023
0.60