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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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SLN
sarcolipin
Chromosome 11 · 11q22.3
NCBI Gene: 6588Ensembl: ENSG00000170290.5HGNC: HGNC:11089UniProt: A0A158RFT9
32PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingnegative regulation of ATPase-coupled calcium transmembrane transporter activitysarcoplasmic reticulumregulation of ATPase-coupled calcium transmembrane transporter activitylower urinary tract calculusocular hypotensioncoronary artery diseaseliver disease
✦AI Summary

Sarcolipin (SLN) is a small regulatory protein that reversibly inhibits the sarco(endo)plasmic reticulum Ca2+-ATPase (SERCA) pump by decreasing the apparent affinity of SERCA1 and SERCA2 for Ca2+ 1. SLN uncouples SERCA Ca2+ transport from ATP consumption, directly modulating skeletal muscle relaxation and energy expenditure 1. The protein comprises 31 amino acids with a single transmembrane helix, and is highly expressed in fast-twitch skeletal muscle but expressed at lower levels in slow-twitch muscle and cardiac tissue 2. SLN plays a critical role in non-shivering thermogenesis and calcium homeostasis during muscle adaptation. During muscle development, overload, and atrophy, SLN expression increases dynamically and activates Ca2+ signaling to promote mitochondrial biogenesis, fiber-type shifts, and muscle hypertrophy 1. In muscle disease contexts, SLN upregulation demonstrates a hormesis effect—both excessive and insufficient SLN levels are detrimental to muscle health 1. While some evidence suggests elevated SLN in dystrophic muscle may exacerbate calcium dysregulation, growing literature indicates SLN upregulation protects the SERCA pump and facilitates adaptive remodeling during cellular stress 1. Mutations in the SLN gene have been investigated in Brody disease, an inherited skeletal muscle disorder affecting relaxation, though structural SLN mutations were not identified in examined patients 2.

Sources cited
1
SLN inhibits SERCA pump, uncouples Ca2+ transport from ATP consumption, regulates muscle relaxation and energy expenditure, and dynamics during muscle adaptation including development, overload, and atrophy
PMID: 35044855
2
SLN is a 31 amino acid protein with transmembrane topology, highly expressed in fast-twitch skeletal muscle, mapped to chromosome 11q22-q23, and investigated in Brody disease
PMID: 9367679
⚠Limited data available — This gene has 2 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
lower urinary tract calculusOpen Targets
0.31Weak
ocular hypotensionOpen Targets
0.23Weak
coronary artery diseaseOpen Targets
0.23Weak
liver diseaseOpen Targets
0.11Weak
abscessOpen Targets
0.10Weak
cellulitisOpen Targets
0.10Weak
osteitis deformansOpen Targets
0.09Suggestive
aneurysmOpen Targets
0.08Suggestive
HypercholesterolemiaOpen Targets
0.06Suggestive
NephropathyOpen Targets
0.05Suggestive
PLIN1-related familial partial lipodystrophyOpen Targets
0.04Suggestive
nephritisOpen Targets
0.04Suggestive
lipodystrophy, congenital generalized, type 5Open Targets
0.04Suggestive
CIDEC-related familial partial lipodystrophyOpen Targets
0.04Suggestive
congenital generalized lipodystrophy type 3Open Targets
0.04Suggestive
Generalized congenital lipodystrophy with myopathyOpen Targets
0.04Suggestive
obesity due to melanocortin 4 receptor deficiencyOpen Targets
0.04Suggestive
familial partial lipodystrophy, Kobberling typeOpen Targets
0.04Suggestive
Familial partial lipodystrophy, Köbberling typeOpen Targets
0.04Suggestive
PPARG-related familial partial lipodystrophyOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ATP2A2Protein interaction100%CASQ1Protein interaction88%NEBProtein interaction88%STRIT1Protein interaction85%ATP2A1Protein interaction85%CKMProtein interaction82%
Tissue Expression6 tissues
Heart
100%
Lung
31%
Brain
10%
Liver
5%
Ovary
3%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
SLNATP2A2CASQ1NEBSTRIT1ATP2A1CKM
PROTEIN STRUCTURE
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PDB1JDM · NMR
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.63LoF Tolerant
pLIⓘ
0.45Tolerant
Observed/Expected LoF0.00 [0.00–1.63]
RankingsWhere SLN stands among ~20K protein-coding genes
  • #11,614of 20,598
    Most Researched32
  • #15,814of 17,882
    Most Constrained (LOEUF)1.63
Genes detectedSLN
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Solid lipid nanoparticles (SLN) for controlled drug delivery - a review of the state of the art.
PMID: 10840199
Eur J Pharm Biopharm · 2000
1.00
2
Sentinel lymph node (SLN) concept in cervical cancer: Current limitations and unanswered questions.
PMID: 30318103
Gynecol Oncol · 2019
0.90
3
Solid lipid nanoparticles (SLN) and nanostructured lipid carriers (NLC) for the delivery of bioactives sourced from plants: part I - composition and production methods.
PMID: 39370828
Expert Opin Drug Deliv · 2024
0.80
4
Chitosan-enclosed SLN improved SV-induced hepatocellular cell carcinoma death by modulation of IQGAP gene expression, JNK, and HDAC activities.
PMID: 39023688
Mol Biol Rep · 2024
0.70
5
Role of sentinel lymph node biopsy for gynecologic cancers.
PMID: 34967810
Curr Opin Obstet Gynecol · 2022
0.60