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25 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SNU13
small nuclear ribonucleoprotein 13
Chromosome 22 · 22q13.2
NCBI Gene: 4809Ensembl: ENSG00000100138.15HGNC: HGNC:7819UniProt: P55769
167PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
dense fibrillar componentATPase bindingnucleolusU4atac snRNPatrial fibrillationhypothyroidismacute lymphoblastic leukemiaintelligence
✦AI Summary

SNU13 is a core component of the small subunit (SSU) processome that coordinates ribosomal RNA processing and pre-mRNA splicing. During ribosome biogenesis, SNU13 assembles within the SSU processome to facilitate pre-rRNA folding, modification, and cleavage 1. As a spliceosomal component, SNU13 binds the 5'-stem-loop of U4 snRNA and undergoes conformational changes essential for spliceosome assembly 23. SNU13 also functions as a core protein in box C/D small nucleolar ribonucleoproteins (snoRNPs), where it associates with NOP58, NOP56, and FBL to direct 2'-O-methylation of ribosomal and messenger RNAs 45. The structural and functional roles of SNU13 are highly conserved across eukaryotic species, including reduced-complexity algal spliceosomes 6. SNU13 assembly into C/D snoRNPs involves ordered loading via cofactors like Bcd1p and NUFIP1 75. Clinically, aberrant SNU13 secretion in ovarian cancer cells, translocating from nucleus to extracellular vesicles, promotes therapy resistance 8. Additionally, SNU13 expression changes correlate with immune infiltration in colorectal cancer 9 and diagnostic accuracy in acute ischemic stroke 10.

Sources cited
1
SNU13 function in SSU processome assembly and pre-rRNA processing
PMID: 34516797
2
SNU13 binds U4 snRNA 5'-stem-loop and undergoes conformational change
PMID: 10545122
3
SNU13 spliceosome assembly role and RNA-binding conformational change
PMID: 17412961
4
SNU13 as core component of box C/D snoRNP complexes
PMID: 39570315
5
SNU13 assembly with NOP58, NOP56, FBL in C/D snoRNPs and NUFIP1 interaction
PMID: 27594683
6
Conservation of SNU13 structure and function across eukaryotic species
PMID: 26833716
7
SNU13 loading during C/D snoRNP biogenesis via assembly factors
PMID: 30700579
8
SNU13 secretion in ovarian cancer promotes therapy resistance
PMID: 38898005
9
SNU13 correlation with immune infiltration in colorectal cancer
PMID: 38715816
10
SNU13 as hub metabolism-related gene with diagnostic value in acute ischemic stroke
PMID: 38850201
Disease Associationsⓘ20
atrial fibrillationOpen Targets
0.12Weak
hypothyroidismOpen Targets
0.12Weak
acute lymphoblastic leukemiaOpen Targets
0.05Suggestive
intelligenceOpen Targets
0.04Suggestive
cutaneous melanomaOpen Targets
0.04Suggestive
leukemiaOpen Targets
0.04Suggestive
bladder calculusOpen Targets
0.03Suggestive
morbid obesityOpen Targets
0.03Suggestive
major depressive disorderOpen Targets
0.03Suggestive
acute myeloid leukemiaOpen Targets
0.02Suggestive
Insulin resistanceOpen Targets
0.02Suggestive
mixed connective tissue diseaseOpen Targets
0.02Suggestive
skin neoplasmOpen Targets
0.02Suggestive
type 2 diabetes mellitusOpen Targets
0.02Suggestive
Abnormality of the liverOpen Targets
0.02Suggestive
nephrolithiasisOpen Targets
0.02Suggestive
triple-negative breast cancerOpen Targets
0.02Suggestive
cancerOpen Targets
0.02Suggestive
SepsisOpen Targets
0.02Suggestive
obesityOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
DKC1Protein interaction100%FBLProtein interaction100%SNRPGProtein interaction100%LSM6Protein interaction100%LSM7Protein interaction100%LSM5Protein interaction100%
Tissue Expression6 tissues
Brain
100%
Heart
84%
Ovary
54%
Bone Marrow
51%
Lung
45%
Liver
39%
Gene Interaction Network
Click a node to explore
SNU13DKC1FBLSNRPGLSM6LSM7LSM5
PROTEIN STRUCTURE
Preparing viewer…
PDB2OZB · 2.60 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.49Moderately Constrained
pLIⓘ
0.96Intolerant
Observed/Expected LoF0.16 [0.06–0.49]
RankingsWhere SNU13 stands among ~20K protein-coding genes
  • #2,677of 20,598
    Most Researched167 · top quartile
  • #2,915of 17,882
    Most Constrained (LOEUF)0.49 · top quartile
Genes detectedSNU13
Sources retrieved25 papers
Response time—
📄 Sources
25▼
1
Therapy-induced secretion of spliceosomal components mediates pro-survival crosstalk between ovarian cancer cells.
PMID: 38898005
Nat Commun · 2024
1.00
2
Conserved structure of Snu13 from the highly reduced spliceosome of Cyanidioschyzon merolae.
PMID: 26833716
Protein Sci · 2016
0.90
3
Bcd1p controls RNA loading of the core protein Nop58 during C/D box snoRNP biogenesis.
PMID: 30700579
RNA · 2019
0.80
4
The yeast C/D box snoRNA U14 adopts a "weak" K-turn like conformation recognized by the Snu13 core protein in solution.
PMID: 30914254
Biochimie · 2019
0.80
5
Gene Expression Alteration of Sperm-Associated Antigens in Human Cryopreserved Sperm.
PMID: 34009011
Biopreserv Biobank · 2021
0.70