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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SNX19
sorting nexin 19
Chromosome 11 · 11q24.3-q25
NCBI Gene: 399979Ensembl: ENSG00000120451.11HGNC: HGNC:21532UniProt: B7ZAU9
50PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingchondrocyte differentiationinsulin secretiondense core granule maturationschizophreniaobesityautism spectrum disorderdiabetes mellitus
✦AI Summary

SNX19 (sorting nexin 19) is a multifunctional protein involved in intracellular vesicle trafficking and membrane dynamics. The protein contains a PX domain that specifically binds phosphatidylinositol 3-phosphate (PtdIns(3P)), enabling its localization to early endosomal membranes 1. SNX19 plays important roles in pancreatic beta-cell function, where it interacts with IA-2 (islet antigen-2) and may regulate insulin secretion by maintaining insulin-containing dense core vesicles 2. Beyond metabolic functions, SNX19 demonstrates significant involvement in dopamine D1 receptor trafficking through interactions with lipid raft components caveolin-1 and flotillin-1, containing specific binding motifs for these proteins that are essential for proper receptor endocytosis and signaling 3. The protein also functions as a chondrogenic factor, promoting cartilage differentiation and being expressed in limb cartilage during development 4. Notably, SNX19 has emerged as a schizophrenia risk gene, with disease-associated genetic variants influencing multiple transcript classes, particularly those lacking the characteristic nexin C-terminal domain 5. In human brain tissue, SNX19 is preferentially expressed in glutamatergic neurons in the dorsolateral prefrontal cortex, suggesting its potential role in schizophrenia pathophysiology through disruption of glutamatergic function 6.

Sources cited
1
SNX19 contains a PX domain that binds phosphatidylinositol 3-phosphate and localizes to early endosomal membranes
PMID: 25148684
2
SNX19 interacts with IA-2 and may be involved in insulin secretion regulation
PMID: 16273344
3
SNX19 contains caveolin-1 and flotillin-1 binding motifs essential for D1 receptor trafficking and signaling
PMID: 40002894
4
SNX19 functions as a chondrogenic factor promoting cartilage differentiation
PMID: 19877062
5
Schizophrenia risk variants influence multiple classes of SNX19 transcripts, particularly those lacking the nexin C-terminal domain
PMID: 30635639
6
SNX19 is preferentially expressed in glutamatergic neurons in human dorsolateral prefrontal cortex
PMID: 33649454
Disease Associationsⓘ20
schizophreniaOpen Targets
0.45Moderate
obesityOpen Targets
0.37Weak
autism spectrum disorderOpen Targets
0.35Weak
diabetes mellitusOpen Targets
0.34Weak
knee fractureOpen Targets
0.32Weak
morbid obesityOpen Targets
0.32Weak
anorexia nervosaOpen Targets
0.32Weak
spinal cord injuryOpen Targets
0.29Weak
major depressive disorderOpen Targets
0.28Weak
type 2 diabetes mellitusOpen Targets
0.28Weak
overnutritionOpen Targets
0.28Weak
attention deficit hyperactivity disorderOpen Targets
0.27Weak
bipolar disorderOpen Targets
0.27Weak
obsessive-compulsive disorderOpen Targets
0.27Weak
Tourette syndromeOpen Targets
0.27Weak
intelligenceOpen Targets
0.23Weak
Alzheimer diseaseOpen Targets
0.23Weak
adolescent idiopathic scoliosisOpen Targets
0.20Weak
megaloblastic anemiaOpen Targets
0.20Weak
Hodgkins lymphomaOpen Targets
0.19Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
FAM3BShared pathway50%MAFAShared pathway33%PTPRNShared pathway20%CREB3L2Shared pathway20%CPLX3Shared pathway17%SLC26A2Shared pathway17%
Tissue Expression6 tissues
Heart
100%
Brain
88%
Liver
73%
Lung
63%
Ovary
54%
Bone Marrow
36%
Gene Interaction Network
Click a node to explore
SNX19FAM3BMAFAPTPRNCREB3L2CPLX3SLC26A2
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q92543
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.88LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.71 [0.58–0.88]
RankingsWhere SNX19 stands among ~20K protein-coding genes
  • #8,882of 20,598
    Most Researched50
  • #7,866of 17,882
    Most Constrained (LOEUF)0.88
Genes detectedSNX19
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Integration of summary data from GWAS and eQTL studies predicts complex trait gene targets.
PMID: 27019110
Nat Genet · 2016
1.00
2
SNX19 Interacts with Caveolin-1 and Flotillin-1 to Regulate D
PMID: 40002894
Biomedicines · 2025
0.90
3
Single molecule in situ hybridization reveals distinct localizations of schizophrenia risk-related transcripts SNX19 and AS3MT in human brain.
PMID: 33649454
Mol Psychiatry · 2021
0.80
4
The IA-2 interactome.
PMID: 16273344
Diabetologia · 2005
0.70
5
Structural basis for different phosphoinositide specificities of the PX domains of sorting nexins regulating G-protein signaling.
PMID: 25148684
J Biol Chem · 2014
0.60