HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
7 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
SRGAP2B
SLIT-ROBO Rho GTPase activating protein 2B
Chromosome 1 · 1q21.1
NCBI Gene: 647135Ensembl: ENSG00000196369.12HGNC: HGNC:35237UniProt: A0A286YEY3
12PubMed Papers
8Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
regulation of synapse assemblyglutamatergic synapsenegative regulation of cell migrationGTPase activator activitygoutAlzheimer diseasecolorectal carcinomaIntellectual disability
✦AI Summary

SRGAP2B is a human-specific gene duplication of the ancestral synaptic regulator SRGAP2A that emerged approximately 3.4 million years ago 1. Primary Function: SRGAP2B regulates synaptic development through inhibition of SRGAP2A function via heterodimerization, reducing SRGAP2A protein levels in a proteasome-dependent manner 2. Unlike SRGAP2C, SRGAP2B does not induce long-lasting changes in synaptic density throughout adulthood 2. Mechanism: SRGAP2B promotes synaptic neoteny—the prolonged developmental immaturity of human synapses—by reducing SRGAP2A levels, thereby increasing postsynaptic SYNGAP1 accumulation 3. SRGAP2B also induces neotenic features in microglia structural and functional maturation, non-cell autonomously impacting neuronal synaptic development 4. Disease Relevance: SRGAP2B downregulation accelerates synaptic development and can modify phenotypic expression of genetic mutations causing intellectual disability and autism spectrum disorder through regulation of human synaptic neoteny 3. A CREBBP-SRGAP2B fusion gene has been identified in pediatric acute lymphoblastic leukemia cases, with potential implications for disease prognosis 5. SRGAP2B variants have been detected in proliferative verrucous leukoplakia 6. Clinical Significance: SRGAP2B's role in human brain evolution and its involvement in developmental disorders suggest potential therapeutic targets for neurodevelopmental conditions and cancer prognosis stratification.

Sources cited
1
SRGAP2B is a human-specific duplication of SRGAP2A that occurred approximately 3.4 million years ago
PMID: 22559943
2
SRGAP2B inhibits SRGAP2A through heterodimerization and proteasome-dependent degradation; unlike SRGAP2C, it cannot induce long-lasting synaptic density changes
PMID: 31822692
3
SRGAP2B promotes synaptic neoteny by reducing SRGAP2A levels and increasing SYNGAP1 accumulation; its downregulation accelerates synaptic development and modifies phenotypic expression of ID/ASD mutations
PMID: 39406239
4
SRGAP2B induces neotenic features in microglia maturation and non-cell autonomously impacts neuronal synaptic development
PMID: 38979266
5
CREBBP-SRGAP2B fusion gene identified in pediatric acute lymphoblastic leukemia with potential disease prognosis implications
PMID: 31096545
6
SRGAP2B variants detected as somatic mutation drivers in proliferative verrucous leukoplakia
PMID: 41273738
Disease Associationsⓘ8
goutOpen Targets
0.27Weak
Alzheimer diseaseOpen Targets
0.01Suggestive
colorectal carcinomaOpen Targets
0.00Suggestive
Intellectual disabilityOpen Targets
0.00Suggestive
autism spectrum disorderOpen Targets
0.00Suggestive
Neurodevelopmental disorderOpen Targets
0.00Suggestive
Neurodevelopmental delayOpen Targets
0.00Suggestive
Nijmegen breakage syndromeOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SRGAP1Shared pathway100%SRGAP3Shared pathway75%LSAMPShared pathway50%SRGAP2CShared pathway43%ARHGAP4Shared pathway38%CNTNAP3BShared pathway33%
Tissue Expression6 tissues
Brain
100%
Lung
60%
Ovary
59%
Liver
19%
Bone Marrow
13%
Heart
4%
Gene Interaction Network
Click a node to explore
SRGAP2BSRGAP1SRGAP3LSAMPSRGAP2CARHGAP4CNTNAP3B
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt P0DMP2
View on AlphaFold ↗
RankingsWhere SRGAP2B stands among ~20K protein-coding genes
  • #16,582of 20,598
    Most Researched12
Genes detectedSRGAP2B
Sources retrieved7 papers
Response time—
📄 Sources
7▼
1
Synaptic neoteny of human cortical neurons requires species-specific balancing of SRGAP2-SYNGAP1 cross-inhibition.
PMID: 39406239
Neuron · 2024
1.00
2
Identification and Characterization of Novel Fusion Genes with Potential Clinical Applications in Mexican Children with Acute Lymphoblastic Leukemia.
PMID: 31096545
Int J Mol Sci · 2019
0.86
3
Human-specific paralogs of SRGAP2 induce neotenic features of microglia structural and functional maturation.
PMID: 38979266
bioRxiv · 2024
0.71
4
Evolution of human-specific neural SRGAP2 genes by incomplete segmental duplication.
PMID: 22559943
Cell · 2012
0.57
5
The human-specific paralogs SRGAP2B and SRGAP2C differentially modulate SRGAP2A-dependent synaptic development.
PMID: 31822692
Sci Rep · 2019
0.43