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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SSX2
SSX family member 2
Chromosome X · Xp11.22
NCBI Gene: 6757Ensembl: ENSG00000241476.9HGNC: HGNC:11336UniProt: Q16385
59PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
OncogeneTranscription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingnucleusregulation of DNA-templated transcriptionsynovial sarcomabiphasic synovial sarcomamalignant peripheral nerve sheath tumorliposarcoma
✦AI Summary

SSX2 is a chrX-associated transcriptional regulator normally expressed only in testis and thyroid, but aberrantly expressed in various cancers 1. The protein functions as a DNA-binding protein that antagonizes polycomb group (PcG) complexes by disrupting BMI1 and EZH2 PcG body formation and derepressing PcG target genes 2. SSX2 binds double-stranded DNA in a sequence non-specific manner and negatively regulates H3K27me3 histone marks, suggesting it modulates chrX structure indirectly rather than affecting PcG complex composition 2. The protein localizes to the nucleus and promotes formation of novel intranuclear lamin bodies containing A and B type lamins, which is dependent on S-phase progression 3. SSX2 interacts with specific proteins including RAB3IP and SSX2IP through its N-terminal domain 1. In cancer contexts, SSX2 is involved in the pathognomonic t(X;18) translocation creating SYT-SSX2 fusion proteins in synovial sarcoma 45, where it regulates apoptotic pathways by increasing BCL2 while repressing MCL1 and BCL2A1 6. SSX2 serves as a tumor-associated antigen target for cancer immunotherapy approaches 7.

Sources cited
1
SSX2 is a DNA-binding protein that antagonizes PcG complexes and regulates H3K27me3 marks
PMID: 25249625
2
SSX2 is normally expressed only in testis/thyroid but aberrantly in cancers, and interacts with RAB3IP and SSX2IP
PMID: 12007189
3
SSX2 promotes formation of intranuclear lamin bodies in a S-phase dependent manner
PMID: 34808373
4
SYT-SSX2 fusion regulates apoptotic pathways by increasing BCL2 while repressing MCL1 and BCL2A1
PMID: 22797074
5
SSX2 is involved in the t(X;18) translocation creating SYT-SSX2 fusions in synovial sarcoma
PMID: 10398111
6
SYT-SSX2 fusion transcripts can be detected in synovial sarcoma for diagnosis
PMID: 20830232
7
SSX2 serves as a tumor-associated antigen target for cancer immunotherapy
PMID: 41482561
Disease Associationsⓘ20
synovial sarcomaOpen Targets
0.39Weak
biphasic synovial sarcomaOpen Targets
0.37Weak
malignant peripheral nerve sheath tumorOpen Targets
0.37Weak
liposarcomaOpen Targets
0.37Weak
rhabdomyosarcomaOpen Targets
0.37Weak
chordomaOpen Targets
0.37Weak
leiomyosarcomaOpen Targets
0.37Weak
undifferentiated pleomorphic sarcomaOpen Targets
0.37Weak
epithelioid sarcomaOpen Targets
0.37Weak
Extraskeletal Ewing Sarcoma/Peripheral Primitive Neuroectodermal TumorOpen Targets
0.37Weak
monophasic synovial sarcomaOpen Targets
0.37Weak
neurofibromaOpen Targets
0.37Weak
Pleural Sarcomatoid MesotheliomaOpen Targets
0.37Weak
pleural solitary fibrous tumorOpen Targets
0.37Weak
plexiform neurofibromaOpen Targets
0.37Weak
Thyroid Gland Spindle Cell Tumor with Thymus-Like DifferentiationOpen Targets
0.37Weak
melanomaOpen Targets
0.30Weak
neoplasmOpen Targets
0.30Weak
acute myeloid leukemiaOpen Targets
0.28Weak
osteosarcomaOpen Targets
0.28Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SSX3Protein interaction94%SSX2IPProtein interaction83%CSAG1Protein interaction80%TLE1Protein interaction79%SS18L1Protein interaction77%SSX2BProtein interaction77%
Tissue Expression6 tissues
Liver
0%
Brain
0%
Heart
0%
Ovary
0%
Lung
0%
Bone Marrow
0%
Gene Interaction Network
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SSX2SSX3SSX2IPCSAG1TLE1SS18L1SSX2B
PROTEIN STRUCTURE
Preparing viewer…
PDB8HQY · 3.05 Å · EM
View on RCSB ↗
RankingsWhere SSX2 stands among ~20K protein-coding genes
  • #7,819of 20,598
    Most Researched59
Genes detectedSSX2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
SSX2 is a novel DNA-binding protein that antagonizes polycomb group body formation and gene repression.
PMID: 25249625
Nucleic Acids Res · 2014
1.00
2
SS18-SSX2 and the mitochondrial apoptosis pathway in mouse and human synovial sarcomas.
PMID: 22797074
Oncogene · 2013
0.90
3
Dual colour fluorescence in situ hybridization to paraffin-embedded samples to deduce the presence of the der(X)t(X;18)(p11.2;q11.2) and involvement of either the SSX1 or SSX2 gene: a diagnostic and prognostic aid for synovial sarcoma.
PMID: 10398111
J Pathol · 1999
0.80
4
The cancer-related protein SSX2 interacts with the human homologue of a Ras-like GTPase interactor, RAB3IP, and a novel nuclear protein, SSX2IP.
PMID: 12007189
Genes Chromosomes Cancer · 2002
0.70
5
SSX2 promotes the formation of a novel type of intranuclear lamin bodies.
PMID: 34808373
Int J Biochem Cell Biol · 2022
0.60