HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
TBC1D22A
TBC1 domain family member 22A
Chromosome 22 · 22q13.31
NCBI Gene: 25771Ensembl: ENSG00000054611.14HGNC: HGNC:1309UniProt: A0A0A0MRY0
30PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein homodimerization activityprotein bindingregulation of cilium assembly14-3-3 protein bindingsmoking cessationsleep apneaSleep Disordercardiomyopathy
✦AI Summary

TBC1D22A is a GTPase-activating protein (GAP) that regulates Rab family GTPases, primarily involved in vesicular trafficking and cellular signaling pathways 1. The protein localizes to the Golgi apparatus and interacts with ACBD3, a key Golgi adaptor protein, competing with phosphatidylinositol 4-kinase for binding sites 2. TBC1D22A participates in tight junction and epithelial adherens junction signaling, with evidence suggesting roles in GTPase-mediated signal transduction 3. In cancer biology, TBC1D22A expression is elevated in ovarian serous cystadenocarcinoma and independently predicts poor overall survival, progression-free survival, and disease-free survival 1. High TBC1D22A expression correlates with increased M2 macrophage infiltration, elevated immune checkpoint expression, and reduced chemosensitivity to cisplatin and paclitaxel 1. Similarly, TBC1D22A was identified as a poor prognostic gene in cisplatin-resistant ovarian cancer 4. Beyond oncology, TBC1D22A is implicated in neurodevelopmental disorders. A 3 Mb genomic region containing TBC1D22A on chromosome 22.31 associates significantly with seizure prevalence in Phelan-McDermid syndrome 5, and the gene is a candidate contributor to PMS phenotypes 6. Additionally, TBC1D22A variants appear involved in monozygotic twinning through GTPase-mediated pathways 3.

Sources cited
1
TBC1D22A is elevated in ovarian serous cystadenocarcinoma, independently predicts poor prognosis (OS, PFS, DSS, DFS), correlates with M2 macrophage infiltration and immune checkpoint expression, and associates with reduced chemosensitivity
PMID: 39439452
2
TBC1D22A is a Rab33 GTPase-activating protein that interacts with ACBD3 at the Golgi, competing with PI4KB for binding sites
PMID: 23572552
3
TBC1D22A carries SNVs involved in GTPase family-mediated signal pathway and epithelial adherens junction signaling in familial monozygotic twinning
PMID: 30064533
4
A 3 Mb genomic region containing TBC1D22A on 22q13.31 is significantly associated with seizure prevalence in Phelan-McDermid syndrome
PMID: 34664257
5
TBC1D22A is identified as a candidate gene contributing to Phelan-McDermid syndrome phenotypes on chromosome 22q13.3
PMID: 40429797
6
TBC1D22A is identified as a poor prognostic gene in cisplatin-resistant ovarian cancer
PMID: 39103807
7
TBC1D22A shows high frequency of copy number variations (10/98) in hepatocellular carcinomas, linked to growth regulation pathways
PMID: 22326833
Disease Associationsⓘ20
smoking cessationOpen Targets
0.39Weak
sleep apneaOpen Targets
0.38Weak
Sleep DisorderOpen Targets
0.32Weak
cardiomyopathyOpen Targets
0.32Weak
cervical carcinomaOpen Targets
0.28Weak
Benign Thyroid Gland NeoplasmOpen Targets
0.27Weak
breast benign neoplasmOpen Targets
0.26Weak
response to antihypertensive drugOpen Targets
0.26Weak
injuryOpen Targets
0.26Weak
Hodgkins lymphomaOpen Targets
0.26Weak
bipolar disorderOpen Targets
0.25Weak
benign neoplasm of adrenal glandOpen Targets
0.25Weak
frozen shoulderOpen Targets
0.25Weak
myeloid leukemiaOpen Targets
0.24Weak
sialadenitisOpen Targets
0.24Weak
cornea transplantationOpen Targets
0.24Weak
placenta praeviaOpen Targets
0.23Weak
duodenal ulcerOpen Targets
0.23Weak
smoking initiationOpen Targets
0.18Weak
sensory perception of smellOpen Targets
0.17Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TBC1D1Shared pathway100%TBC1D3Shared pathway100%TBC1D16Shared pathway100%TBC1D19Shared pathway100%ACBD3Protein interaction87%TBC1D22BShared pathway76%
Tissue Expression6 tissues
Lung
100%
Liver
70%
Heart
68%
Ovary
66%
Bone Marrow
55%
Brain
54%
Gene Interaction Network
Click a node to explore
TBC1D22ATBC1D1TBC1D3TBC1D16TBC1D19ACBD3TBC1D22B
PROTEIN STRUCTURE
Preparing viewer…
PDB2QFZ · 2.10 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.88LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.68 [0.53–0.88]
RankingsWhere TBC1D22A stands among ~20K protein-coding genes
  • #12,053of 20,598
    Most Researched30
  • #7,840of 17,882
    Most Constrained (LOEUF)0.88
Genes detectedTBC1D22A
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
High Expression of TBC1 Domain Family Member 22A is Related to Poor Prognosis in Ovarian Serous Cystadenocarcinoma.
PMID: 39439452
Int J Med Sci · 2024
1.00
2
TBC1D22B Regulates ER-to-Golgi Trafficking via RAB1B Inactivation and Promotes Oncogenic Programs in Breast Cancer.
PMID: 40878439
Adv Sci (Weinh) · 2025
0.90
3
Four-Generation Pedigree of Monozygotic Female Twins Reveals Genetic Factors in Twinning Process by Whole-Genome Sequencing.
PMID: 30064533
Twin Res Hum Genet · 2018
0.80
4
Genotype-Phenotype Associations in Phelan-McDermid Syndrome: Insights into Novel Genes Beyond
PMID: 40429797
Int J Mol Sci · 2025
0.70
5
Gene deletions and amplifications in human hepatocellular carcinomas: correlation with hepatocyte growth regulation.
PMID: 22326833
Am J Pathol · 2012
0.60