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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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TCEA3
transcription elongation factor A3
Chromosome 1 · 1p36.12
NCBI Gene: 6920Ensembl: ENSG00000204219.11HGNC: HGNC:11615UniProt: B4DUM4
25PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingtranscription elongation by RNA polymerase IInucleustranscription elongation factor activityatrial fibrillationrheumatic diseaseHypercholesterolemiainjury
✦AI Summary

TCEA3 (transcription elongation factor A3) is a member of the TFIIS family that facilitates RNA polymerase II transcription elongation by helping polymerase bypass template-encoded arresting sites that normally trap elongating complexes 1. During myogenesis, TCEA3 is upregulated and directly recruited by myogenic regulatory factors (MyoD and myogenin) to promote muscle-specific gene expression, traveling with elongating polymerase II through gene coding regions 1. Beyond its canonical elongation function, TCEA3 exhibits tumor-suppressive properties across multiple cancer types. In gastric cancer, TCEA3 expression is significantly downregulated, and restoration inhibits proliferation and induces apoptosis 2. Similarly, TCEA3 is suppressed in ovarian cancer and rhabdomyosarcoma; ectopic expression triggers JNK-dependent apoptosis in ovarian cancer via TGFβ receptor I interaction 3 and activates both intrinsic and extrinsic apoptotic pathways in rhabdomyosarcoma 4. Conversely, in non-small cell lung cancer, elevated tRF-Leu-CAG suppresses TCEA3 expression, promoting proliferation, migration, and paclitaxel resistance through enhanced autophagy 5. In biliary atresia, TCEA3 is downregulated and shows potential causal association with disease pathogenesis 6. The linc01105/miR-650/TCEA3 axis regulates gastric cancer growth and metastasis, with TCEA3 downregulation associated with poor prognosis 7. These findings establish TCEA3 as both a transcriptional regulator and apoptosis inducer with significant clinical relevance in cancer and developmental disease.

Sources cited
1
TCEA3 is upregulated during myogenesis, interacts with myogenic regulatory factors, and co-travels with RNA polymerase II during elongation
PMID: 31158246
2
TCEA3 is downregulated in gastric cancer tissues; its upregulation inhibits proliferation and induces apoptosis
PMID: 26498664
3
TCEA3 binds TGFβ receptor I and induces Smad-independent, JNK-dependent apoptosis in ovarian cancer cells
PMID: 23357533
4
TCEA3 is suppressed in rhabdomyosarcoma; ectopic expression inhibits proliferation and initiates caspase-dependent apoptosis
PMID: 31988307
5
tRF-Leu-CAG promotes NSCLC tumorigenesis by targeting and silencing TCEA3, increasing autophagy and paclitaxel resistance
PMID: 39198937
6
TCEA3 is downregulated in biliary atresia liver tissues with potential causal relevance to disease pathogenesis
PMID: 40665272
7
linc01105 inhibits gastric cancer growth by regulating the miR-650/TCEA3 axis; low TCEA3 expression correlates with poor prognosis
PMID: 40493903
Disease Associationsⓘ20
atrial fibrillationOpen Targets
0.44Moderate
rheumatic diseaseOpen Targets
0.31Weak
HypercholesterolemiaOpen Targets
0.19Weak
injuryOpen Targets
0.09Suggestive
cancerOpen Targets
0.08Suggestive
gastric cancerOpen Targets
0.07Suggestive
colorectal carcinomaOpen Targets
0.04Suggestive
heart failureOpen Targets
0.03Suggestive
ovarian cancerOpen Targets
0.03Suggestive
neoplasmOpen Targets
0.03Suggestive
risk-taking behaviourOpen Targets
0.02Suggestive
adenomaOpen Targets
0.02Suggestive
glioblastoma multiformeOpen Targets
0.02Suggestive
cardiac hypertrophyOpen Targets
0.02Suggestive
astrocytomaOpen Targets
0.02Suggestive
carcinomaOpen Targets
0.01Suggestive
oral squamous cell carcinomaOpen Targets
0.01Suggestive
ovarian carcinomaOpen Targets
0.01Suggestive
colorectal cancerOpen Targets
0.01Suggestive
rhabdomyosarcomaOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TCEA1Shared pathway100%TCEANCShared pathway100%TCEANC2Shared pathway100%LEO1Protein interaction100%RTF1Protein interaction100%GTF2F2Protein interaction100%
Tissue Expression6 tissues
Liver
100%
Ovary
46%
Heart
40%
Lung
15%
Brain
3%
Bone Marrow
1%
Gene Interaction Network
Click a node to explore
TCEA3TCEA1TCEANCTCEANC2LEO1RTF1GTF2F2
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt O75764
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.06LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.80 [0.61–1.06]
RankingsWhere TCEA3 stands among ~20K protein-coding genes
  • #13,092of 20,598
    Most Researched25
  • #10,707of 17,882
    Most Constrained (LOEUF)1.06
Genes detectedTCEA3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Oncogenic tRNA-derived fragment tRF-Leu-CAG promotes tumorigenesis of lung cancer via targeting TCEA3 and increasing autophagy.
PMID: 39198937
J Gene Med · 2024
1.00
2
The transcription elongation factor TCEA3 promotes the activity of the myogenic regulatory factors.
PMID: 31158246
PLoS One · 2019
0.90
3
TCEA3 Attenuates Gastric Cancer Growth by Apoptosis Induction.
PMID: 26498664
Med Sci Monit · 2015
0.80
4
Immune and genetic landscapes of biliary atresia: a pathway to precision medicine.
PMID: 40665272
BMC Pediatr · 2025
0.70
5
TCEA3 binds to TGF-beta receptor I and induces Smad-independent, JNK-dependent apoptosis in ovarian cancer cells.
PMID: 23357533
Cell Signal · 2013
0.60