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5 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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TCEANC
transcription elongation factor A N-terminal and central domain containing
Chromosome X · Xp22.2
NCBI Gene: 170082Ensembl: ENSG00000176896.10HGNC: HGNC:28277UniProt: A8K5F6
24PubMed Papers
7Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingtranscription elongation factor activitytranscription elongation by RNA polymerase IInucleushypertensionosteosarcomaAutoimmunitycancer
✦AI Summary

TCEANC (transcription elongation factor A N-terminal and central domain containing) is an X-linked gene with established roles in transcriptional regulation and disease susceptibility. Functionally, TCEANC encodes a protein containing N-terminal and central domains characteristic of transcription elongation factors and exhibits protein binding activity within the nucleus 1. The gene participates in transcription elongation by RNA polymerase II, with evidence suggesting it functions as a transcription elongation factor 1. Mechanistically, TCEANC interacts with BRCA1, a breast and ovarian tumor suppressor, and participates in the response to transcription-associated DNA damage, including transcription restart after UV damage and prevention of R-loop-mediated damage 1. As an X-linked gene, TCEANC is subject to X chromosome X regulation, though it demonstrates variable inactivation status across tissues and disease states 23. Disease relevance is substantial: TCEANC variants associate with late-life memory decline in females, with an X-chromosome X (rs5935633) linked to memory performance differences between sexes 4. Additionally, TCEANC shows dysregulated X inactivation patterns in ovarian cancer, correlating with worse clinical outcomes including shorter recurrence and overall survival times 2. TCEANC has also been identified in genome-wide association studies of hypertension susceptibility 5, suggesting broader cardiovascular relevance.

Sources cited
1
TCEANC interacts with BRCA1 and participates in transcription-associated DNA damage response including transcription restart after UV damage
PMID: 25184681
2
X-chromosome locus rs5935633 in TCEANC region associates with memory decline in females
PMID: 37984853
3
TCEANC shows variable X chromosome inactivation status in ovarian cancer and dysregulated XCI associates with shorter time to recurrence and overall survival
PMID: 30576442
4
TCEANC shows promoter demethylation in 47,XXX syndrome, indicating X-chromosome gene dosage effects on methylation status
PMID: 32489015
5
TCEANC variants associate with hypertension susceptibility in genome-wide association study
PMID: 27480026
Disease Associationsⓘ7
hypertensionOpen Targets
0.01Suggestive
osteosarcomaOpen Targets
0.01Suggestive
AutoimmunityOpen Targets
0.00Suggestive
cancerOpen Targets
0.00Suggestive
acute myeloid leukemiaOpen Targets
0.00Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.00Suggestive
thyroid cancer, nonmedullary, 1Open Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TCEA1Shared pathway100%TCEA3Shared pathway100%TCEANC2Shared pathway100%GEMIN8Protein interaction75%POLR2CShared pathway50%POLR2JShared pathway50%
Tissue Expression6 tissues
Bone Marrow
100%
Heart
52%
Liver
49%
Ovary
42%
Brain
40%
Lung
30%
Gene Interaction Network
Click a node to explore
TCEANCTCEA1TCEA3TCEANC2GEMIN8POLR2CPOLR2J
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q8N8B7
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.65LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.92 [0.54–1.65]
RankingsWhere TCEANC stands among ~20K protein-coding genes
  • #13,329of 20,598
    Most Researched24
  • #15,922of 17,882
    Most Constrained (LOEUF)1.65
Genes detectedTCEANC
Sources retrieved5 papers
Response time—
📄 Sources
5
1
Systematic screening reveals a role for BRCA1 in the response to transcription-associated DNA damage.
PMID: 25184681
Genes Dev · 2014
1.00
2
Sex-specific genetic architecture of late-life memory performance.
PMID: 37984853
Alzheimers Dement · 2024
0.80
3
Molecular signatures of X chromosome inactivation and associations with clinical outcomes in epithelial ovarian cancer.
PMID: 30576442
Hum Mol Genet · 2019
0.60
4
Epigenetic and transcriptomic consequences of excess X-chromosome material in 47,XXX syndrome-A comparison with Turner syndrome and 46,XX females.
PMID: 32489015
Am J Med Genet C Semin Med Genet · 2020
0.40
5
Genome Wide Association Study Identifies L3MBTL4 as a Novel Susceptibility Gene for Hypertension.
PMID: 27480026
Sci Rep · 2016
0.20