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6 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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TCEANC2
transcription elongation factor A N-terminal and central domain containing 2
Chromosome 1 · 1p32.3
NCBI Gene: 127428Ensembl: ENSG00000116205.15HGNC: HGNC:26494UniProt: Q96MN5
20PubMed Papers
8Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingtranscription elongation factor activitytranscription elongation by RNA polymerase IInucleusneurodegenerative diseaseParkinson diseasemyeloid sarcomametastatic melanoma
✦AI Summary

TCEANC2 (transcription elongation factor A N-terminal and central domain containing 2) is a nuclear protein with transcription elongation factor activity that mediates protein binding and functions in RNA polymerase II-dependent transcription elongation. The gene is located in the PARK10 locus on chromosome 1 and has been investigated for associations with neurological and inflammatory diseases. TCEANC2 variants, particularly rs10788972, were identified as strongly associated with neuropathologically confirmed sporadic Parkinson's disease in American populations 1, though this association was not replicated in Chinese Han patients 2 or Hungarian populations 3, suggesting population-specific genetic effects. Beyond PD, prenatal mercury exposure was associated with altered DNA methylation patterns at the TCEANC2 locus in newborn cord blood, potentially reflecting mercury-induced changes in cell composition or epigenetic modifications 4. Recent transcriptomic analyses identified TCEANC2 expression in CD16+ neutrophils as part of combined gene signatures for distinguishing Behçet's disease clinical subtypes 5. The gene was also detected in genome-wide homozygosity scans of South American camelids as part of selection signatures in llamas 6. These findings suggest TCEANC2 participates in both transcriptional regulation and disease susceptibility, though its precise molecular mechanisms remain incompletely characterized.

Sources cited
1
rs10788972 variant in TCEANC2 within PARK10 locus is strongly associated with neuropathologically confirmed sporadic Parkinson's disease in American populations
PMID: 25663231
2
TCEANC2 rs10788972 and rs12046178 variants show no significant association with sporadic PD in Chinese Han population
PMID: 26432391
3
PARK10 TCEANC2 variants show no significant difference in frequency between Hungarian sporadic PD patients and controls
PMID: 31085292
4
Prenatal mercury concentration is associated with DNA methylation changes at TCEANC2 in newborn cord blood
PMID: 25906783
5
TCEANC2 expression in CD16+ neutrophils serves as diagnostic signature for Behçet's disease phenotype differentiation
PMID: 37341899
6
TCEANC2 is included in overlapping runs of homozygosity in llama genomes, suggesting selection signatures
PMID: 37605116
Disease Associationsⓘ8
neurodegenerative diseaseOpen Targets
0.35Weak
Parkinson diseaseOpen Targets
0.01Suggestive
myeloid sarcomaOpen Targets
0.01Suggestive
metastatic melanomaOpen Targets
0.00Suggestive
acute myeloid leukemiaOpen Targets
0.00Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.00Suggestive
ovarian serous cystadenocarcinomaOpen Targets
0.00Suggestive
thyroid cancer, nonmedullary, 1Open Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TCEA1Shared pathway100%TCEA3Shared pathway100%TCEANCShared pathway100%TAF8Protein interaction77%POLR2CShared pathway50%POLR2JShared pathway50%
Tissue Expression6 tissues
Brain
100%
Heart
59%
Bone Marrow
46%
Lung
45%
Liver
40%
Ovary
36%
Gene Interaction Network
Click a node to explore
TCEANC2TCEA1TCEA3TCEANCTAF8POLR2CPOLR2J
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q96MN5
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.27LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.86 [0.59–1.27]
RankingsWhere TCEANC2 stands among ~20K protein-coding genes
  • #14,286of 20,598
    Most Researched20
  • #13,390of 17,882
    Most Constrained (LOEUF)1.27
Genes detectedTCEANC2
Sources retrieved6 papers
Response time—
📄 Sources
6▼
1
Genome-wide scan for runs of homozygosity in South American Camelids.
PMID: 37605116
BMC Genomics · 2023
1.00
2
Prenatal mercury concentration is associated with changes in DNA methylation at TCEANC2 in newborns.
PMID: 25906783
Int J Epidemiol · 2015
0.83
3
PARK10 is a major locus for sporadic neuropathologically confirmed Parkinson disease.
PMID: 25663231
Neurology · 2015
0.67
4
Integrated analyses delineate distinctive immunological pathways and diagnostic signatures for Behcet's disease by leveraging gene microarray data.
PMID: 37341899
Immunol Res · 2023
0.50
5
Assessment of risk factor variants of LRRK2, MAPT, SNCA and TCEANC2 genes in Hungarian sporadic Parkinson's disease patients.
PMID: 31085292
Neurosci Lett · 2019
0.33