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GeneE
1 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
TRAPPC3L
trafficking protein particle complex subunit 3L
Chromosome 6 Β· 6q22.1
NCBI Gene: 100128327Ensembl: ENSG00000173626.10HGNC: HGNC:21090UniProt: Q5T215
7PubMed Papers
18Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingTRAPP complexintra-Golgi vesicle-mediated transportcytosolneurodegenerative diseasemetabolic syndromeulcerative colitisinfectious arthritis
✦AI Summary

TRAPPC3L encodes a trafficking protein particle complex subunit involved in vesicular transport. Based on limited published evidence, TRAPPC3L functions as a component of the TRAPP complex and mediates endoplasmic reticulum to Golgi transport and intra-Golgi vesicle trafficking through guanyl-nucleotide exchange factor activity. The protein localizes to the cis-Golgi network membrane and cytosol. One study identified TRAPPC3L downregulation and hypermethylation in aflatoxin B1-induced hepatocellular carcinoma transformation 1, suggesting potential involvement in cancer-related pathways, though mechanistic details remain unclear.

Sources cited
1
TRAPPC3L was significantly downregulated and hypermethylated during AFB1-induced malignant transformation of hepatocytes
PMID: 34561900
⚠Limited data available β€” This gene has 1 indexed publication. Summary and analysis may be incomplete.
Disease Associationsβ“˜18
neurodegenerative diseaseOpen Targets
0.25Weak
metabolic syndromeOpen Targets
0.07Suggestive
ulcerative colitisOpen Targets
0.03Suggestive
infectious arthritisOpen Targets
0.02Suggestive
placental retentionOpen Targets
0.02Suggestive
prostate carcinomaOpen Targets
0.02Suggestive
neoplasmOpen Targets
0.01Suggestive
pancreatic carcinomaOpen Targets
0.00Suggestive
cervical cancerOpen Targets
0.00Suggestive
cholangiocarcinomaOpen Targets
0.00Suggestive
colon adenocarcinomaOpen Targets
0.00Suggestive
colorectal adenocarcinomaOpen Targets
0.00Suggestive
esophageal cancerOpen Targets
0.00Suggestive
hepatocellular carcinomaOpen Targets
0.00Suggestive
ovarian serous cystadenocarcinomaOpen Targets
0.00Suggestive
sarcomaOpen Targets
0.00Suggestive
ThymomaOpen Targets
0.00Suggestive
uterine corpus endometrial carcinomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
TRAPPC14Protein interaction100%TRAPPC2Protein interaction94%TRAPPC2BProtein interaction94%TRAPPC8Protein interaction94%TRAPPC12Protein interaction94%TRAPPC4Protein interaction94%
Tissue Expression6 tissues
Brain
100%
Heart
47%
Lung
20%
Liver
12%
Bone Marrow
12%
Ovary
12%
Gene Interaction Network
Click a node to explore
TRAPPC3LTRAPPC14TRAPPC2TRAPPC2BTRAPPC8TRAPPC12TRAPPC4
PROTEIN STRUCTURE
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AlphaFoldAI-predicted Β· UniProt Q5T215
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.48LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF1.01 [0.70–1.48]
RankingsWhere TRAPPC3L stands among ~20K protein-coding genes
  • #17,976of 20,598
    Most Researched7
  • #15,063of 17,882
    Most Constrained (LOEUF)1.48
Genes detectedTRAPPC3L
Sources retrieved1 papers
Response timeβ€”
πŸ“„ Sources
1
1
Gene expression network related to DNA methylation and miRNA regulation during the process of aflatoxin B1-induced malignant transformation of L02 cells.
PMID: 34561900
J Appl Toxicol Β· 2022
1.00