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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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TSNAX
translin associated factor X
Chromosome 1 · 1q42.2
NCBI Gene: 7257Ensembl: ENSG00000116918.16HGNC: HGNC:12380UniProt: Q99598
84PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
siRNA processingprotein bindingRNA bindingnucleoplasmalcohol drinkingtrauma complicationHuntington diseasemajor depressive disorder
✦AI Summary

TSNAX (translin-associated factor X) is a nuclear and cytoplasmic protein that functions as an endonuclease in combination with translin (TSN) to process small interfering RNAs and activate the RNA-induced silencing complex (RISC) 1. The gene undergoes intergenic splicing with the adjacent DISC1 gene on chromosome 1.1, producing both TSNAX-DISC1 fusion proteins and bicistronic transcripts encoding truncated isoforms 1. Beyond its established role in RNA silencing pathways, TSNAX has significant psychiatric disease associations. Genetic polymorphisms in TSNAX are associated with major depressive disorder (MDD) susceptibility and citalopram treatment efficacy 2, bipolar affective disorder 3, and cognitive dysfunction in schizophrenia patients, with specific SNPs influencing performance on attention and memory tasks 4. TSNAX also contributes to spermatogenesis; the TSNAX-interacting protein TSNAXIP1 is essential for proper sperm head morphogenesis and male fertility 5. Additionally, dysregulation of TSNAX-DISC1 chimeric expression has been identified in endometrial carcinoma, where aberrant formation correlates with altered progesterone signaling 6. These findings establish TSNAX as a pleiotropic gene influencing psychiatric vulnerability, cognitive function, reproductive physiology, and potentially cancer development.

Sources cited
1
TSNAX chromosomal location, genomic structure with six exons, and intergenic splicing with DISC1 producing fusion proteins and bicistronic transcripts
PMID: 10945471
2
TSNAX SNPs rs1615409 and rs766288 associated with MDD susceptibility and influence on citalopram efficacy
PMID: 25043320
3
TSNAX genetic polymorphisms influence cognitive functions in schizophrenia patients across multiple cognitive domains
PMID: 37030547
4
TSNAX-DISC1 region shows allelic, genotypic, and haplotypic associations with both bipolar affective disorder and major depressive disorder
PMID: 19255581
5
TSNAX-interacting protein TSNAXIP1 is required for sperm head morphogenesis and male fertility
PMID: 37389156
6
Dysregulation of TSNAX-DISC1 chimeric expression occurs in endometrial carcinoma with effects on steroidogenic factor-1-regulated transcription
PMID: 25239642
Disease Associationsⓘ20
alcohol drinkingOpen Targets
0.29Weak
trauma complicationOpen Targets
0.23Weak
Huntington diseaseOpen Targets
0.04Suggestive
major depressive disorderOpen Targets
0.03Suggestive
uncombable hair syndromeOpen Targets
0.03Suggestive
Griscelli diseaseOpen Targets
0.03Suggestive
Griscelli disease type 1Open Targets
0.03Suggestive
Griscelli syndrome type 1Open Targets
0.03Suggestive
schizophreniaOpen Targets
0.03Suggestive
hepatocellular carcinomaOpen Targets
0.03Suggestive
rhabdomyolysisOpen Targets
0.03Suggestive
mental or behavioural disorderOpen Targets
0.02Suggestive
ventricular fibrillationOpen Targets
0.02Suggestive
methamphetamine dependenceOpen Targets
0.02Suggestive
neoplasmOpen Targets
0.02Suggestive
Abnormality of the gastrointestinal tractOpen Targets
0.02Suggestive
disease of peritoneumOpen Targets
0.02Suggestive
ocular hypotensionOpen Targets
0.02Suggestive
bipolar disorderOpen Targets
0.02Suggestive
mood disorderOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
DICER1Protein interaction100%AGO2Protein interaction96%TSNAXIP1Protein interaction88%TSNProtein interaction85%GOLGA3Protein interaction85%KIF2AProtein interaction81%
Tissue Expression6 tissues
Brain
100%
Heart
73%
Liver
39%
Ovary
39%
Bone Marrow
38%
Lung
35%
Gene Interaction Network
Click a node to explore
TSNAXDICER1AGO2TSNAXIP1TSNGOLGA3KIF2A
PROTEIN STRUCTURE
Preparing viewer…
PDB3QB5 · 2.95 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.65LoF Tolerant
pLIⓘ
0.46Tolerant
Observed/Expected LoF0.39 [0.24–0.65]
RankingsWhere TSNAX stands among ~20K protein-coding genes
  • #5,703of 20,598
    Most Researched84
  • #4,685of 17,882
    Most Constrained (LOEUF)0.65
Genes detectedTSNAX
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
DISC1-TSNAX and DAOA genes in major depression and citalopram efficacy.
PMID: 25043320
J Affect Disord · 2014
1.00
2
Chromosomal location and genomic structure of the human translin-associated factor X gene (TRAX; TSNAX) revealed by intergenic splicing to DISC1, a gene disrupted by a translocation segregating with schizophrenia.
PMID: 10945471
Genomics · 2000
0.90
3
The associations between cognitive functions and TSNAX genetic variations in patients with schizophrenia.
PMID: 37030547
Pharmacol Biochem Behav · 2023
0.80
4
Lack of association between translin-associated factor X gene (TSNAX) and methamphetamine dependence in the Japanese population.
PMID: 21683752
Prog Neuropsychopharmacol Biol Psychiatry · 2011
0.70
5
Association of DISC1 and TSNAX genes and affective disorders in the depression case-control (DeCC) and bipolar affective case-control (BACCS) studies.
PMID: 19255581
Mol Psychiatry · 2010
0.60