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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
TULP1
TUB like protein 1
Chromosome 6 Β· 6p21.31
NCBI Gene: 7287Ensembl: ENSG00000112041.13HGNC: HGNC:12423UniProt: F1T0I9
48PubMed Papers
22Diseases
0Drugs
150Pathogenic Variants
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
positive regulation of phagocytosisdetection of light stimulus involved in visual perceptionprotein bindingcell projectionretinitis pigmentosaLeber congenital amaurosisRetinal dystrophyLeber congenital amaurosis 1
✦AI Summary

TULP1 is a photoreceptor-specific protein essential for retinal function and photoreceptor survival. 1 The protein is exclusively expressed in photoreceptor cells and localized to the outer plexiform layer and inner segments. 1 TULP1 contains a conserved carboxy-terminal tubby domain that selectively binds membrane phosphoinositides, enabling its role as a bipartite bridge coordinating multiple signaling pathways. 2 Functionally, TULP1 is required for normal photoreceptor synapse development and opsin trafficking to photoreceptor cilia. 3 Loss of TULP1 function impairs ciliary structure through downregulation of tektin2, a ciliary microtubule component, and triggers ferroptosis-mediated photoreceptor degeneration. 3 YTHDF1, an m⁢A reader protein, enhances TULP1 mRNA translation efficiency in the retina, highlighting post-transcriptional regulation of TULP1. 4 Mutations in TULP1 cause early-onset severe retinal dystrophy, including Leber congenital amaurosis 15 and retinitis pigmentosa 14. 5 The c.148delG variant produces progressive maculopathy with foveal ellipsoid zone loss predictive of visual decline, suggesting potential therapeutic intervention windows. 6

Sources cited
1
TULP1 is expressed exclusively in photoreceptor cells and localized to the outer plexiform layer and inner segments
PMID: 10509669
2
TULP1 contains a conserved C-terminal tubby domain that binds membrane phosphoinositides and serves as a bipartite bridge coordinating signaling pathways
PMID: 21722349
3
TULP1 is required for opsin trafficking and ciliary structure; loss causes defects in cilia and photoreceptor degeneration via ferroptosis through tektin2 downregulation
PMID: 36396940
4
YTHDF1 enhances TULP1 mRNA translational efficiency in the retina through m⁢A modification recognition
PMID: 40116022
5
TULP1 mutations cause Leber congenital amaurosis and early-onset severe retinal dystrophy
PMID: 38278208
6
The c.148delG TULP1 variant causes infantile/early childhood onset retinal dystrophy with progressive maculopathy; foveal ellipsoid zone width correlates with visual acuity and disease progression
PMID: 36128853
Disease Associationsβ“˜22
retinitis pigmentosaOpen Targets
0.82Strong
Leber congenital amaurosisOpen Targets
0.78Strong
Retinal dystrophyOpen Targets
0.57Moderate
Leber congenital amaurosis 1Open Targets
0.50Moderate
autosomal recessive retinitis pigmentosaOpen Targets
0.46Moderate
Posterior column ataxia - retinitis pigmentosaOpen Targets
0.40Weak
eye diseaseOpen Targets
0.37Weak
Stargardt diseaseOpen Targets
0.36Weak
retinal degenerationOpen Targets
0.35Weak
Abnormality of the eyeOpen Targets
0.34Weak
brachydactylyOpen Targets
0.34Weak
polydactyly, postaxial, type A1Open Targets
0.34Weak
syndactylyOpen Targets
0.34Weak
COVID-19Open Targets
0.29Weak
celiac diseaseOpen Targets
0.27Weak
Inguinal herniaOpen Targets
0.25Weak
neurodegenerative diseaseOpen Targets
0.25Weak
non-alcoholic fatty liver diseaseOpen Targets
0.21Weak
Abnormality of the skeletal systemOpen Targets
0.21Weak
type 2 diabetes mellitusOpen Targets
0.21Weak
Leber congenital amaurosis 15UniProt
Retinitis pigmentosa 14UniProt
Pathogenic Variants150
NM_003322.6(TULP1):c.1199G>A (p.Arg400Gln)Pathogenic
not provided|Leber congenital amaurosis 15|Leber congenital amaurosis|Retinitis pigmentosa 14|Retinitis pigmentosa 14;Leber congenital amaurosis 15|TULP1-related disorder
β˜…β˜…β˜†β˜†2026β†’ Residue 400
NM_003322.6(TULP1):c.1198C>T (p.Arg400Trp)Pathogenic
Leber congenital amaurosis 15|Brachydactyly;Retinal degeneration;Polydactyly, postaxial, type A1;Syndactyly|not provided|Retinal dystrophy|Leber congenital amaurosis
β˜…β˜…β˜†β˜†2026β†’ Residue 400
NM_003322.6(TULP1):c.1496-6C>APathogenic
not provided|Retinitis pigmentosa|Retinal dystrophy|Retinitis pigmentosa 14|Leber congenital amaurosis|Leber congenital amaurosis 15;Retinitis pigmentosa 14
β˜…β˜…β˜†β˜†2025
NM_003322.6(TULP1):c.821del (p.Lys274fs)Pathogenic
Retinal dystrophy|Retinitis pigmentosa 14|not provided|Leber congenital amaurosis 15;Retinitis pigmentosa 14
β˜…β˜…β˜†β˜†2025β†’ Residue 274
NM_003322.6(TULP1):c.1258C>A (p.Arg420Ser)Pathogenic
not provided|Leber congenital amaurosis
β˜…β˜…β˜†β˜†2025β†’ Residue 420
NM_003322.6(TULP1):c.1047T>G (p.Asn349Lys)Pathogenic
Retinitis pigmentosa|Retinal dystrophy|not provided|Leber congenital amaurosis 15;Retinitis pigmentosa 14
β˜…β˜…β˜†β˜†2025β†’ Residue 349
NM_003322.6(TULP1):c.627del (p.Ser210fs)Pathogenic
not provided|Retinitis pigmentosa 14
β˜…β˜…β˜†β˜†2025β†’ Residue 210
NM_003322.6(TULP1):c.1495+1G>APathogenic
not provided|Retinitis pigmentosa 14|Leber congenital amaurosis 15|Retinal dystrophy|Autosomal recessive retinitis pigmentosa|Leber congenital amaurosis 15;Retinitis pigmentosa 14
β˜…β˜…β˜†β˜†2025
NM_003322.6(TULP1):c.238C>T (p.Gln80Ter)Pathogenic
not provided|Retinitis pigmentosa|Retinitis pigmentosa 14;Leber congenital amaurosis 15
β˜…β˜…β˜†β˜†2025β†’ Residue 80
NM_003322.6(TULP1):c.1153G>A (p.Gly385Arg)Likely pathogenic
Retinal dystrophy|Leber congenital amaurosis
β˜…β˜…β˜†β˜†2025β†’ Residue 385
NM_003322.6(TULP1):c.487C>T (p.Gln163Ter)Pathogenic
Retinitis pigmentosa|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 163
NM_003322.6(TULP1):c.1255C>T (p.Arg419Trp)Pathogenic
not provided|Retinal dystrophy|Leber congenital amaurosis 15;Retinitis pigmentosa 14|Retinitis pigmentosa 14
β˜…β˜…β˜†β˜†2025β†’ Residue 419
NM_003322.6(TULP1):c.932G>A (p.Arg311Gln)Pathogenic
Retinitis pigmentosa 14|not provided|TULP1-related disorder|Retinitis pigmentosa 14;Leber congenital amaurosis 15
β˜…β˜…β˜†β˜†2025β†’ Residue 311
NM_003322.6(TULP1):c.629C>G (p.Ser210Ter)Pathogenic
not provided|Leber congenital amaurosis 15;Retinitis pigmentosa 14|Retinitis pigmentosa 14
β˜…β˜…β˜†β˜†2025β†’ Residue 210
NM_003322.6(TULP1):c.525dup (p.Pro176fs)Pathogenic
Retinal dystrophy|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 176
NM_003322.6(TULP1):c.931C>T (p.Arg311Trp)Pathogenic
Leber congenital amaurosis 1|not provided|Retinitis pigmentosa 14|Retinitis pigmentosa 14;Leber congenital amaurosis 15|Leber congenital amaurosis
β˜…β˜…β˜†β˜†2025β†’ Residue 311
NM_003322.6(TULP1):c.901C>T (p.Gln301Ter)Pathogenic
Retinitis pigmentosa 14|Leber congenital amaurosis|Abnormality of the eye|Autosomal recessive retinitis pigmentosa|not provided|Leber congenital amaurosis 15
β˜…β˜…β˜†β˜†2025β†’ Residue 301
NM_003322.6(TULP1):c.1145T>C (p.Phe382Ser)Pathogenic
Retinitis pigmentosa 14|Retinitis pigmentosa|not provided|Retinal dystrophy|Leber congenital amaurosis
β˜…β˜…β˜†β˜†2025β†’ Residue 382
NM_003322.6(TULP1):c.148del (p.Glu50fs)Pathogenic
Leber congenital amaurosis 15|not provided|Leber congenital amaurosis 15;Retinitis pigmentosa 14
β˜…β˜…β˜†β˜†2025β†’ Residue 50
NM_003322.6(TULP1):c.1376T>A (p.Ile459Lys)Likely pathogenic
Retinitis pigmentosa 14|not provided|Leber congenital amaurosis
β˜…β˜…β˜†β˜†2025β†’ Residue 459
View on ClinVar β†—
Related Genes
AIPL1Protein interaction93%CRXProtein interaction86%GUCY2DProtein interaction86%IMPDH1Protein interaction86%RPGRIP1Protein interaction86%PCAREProtein interaction84%
Tissue Expression6 tissues
Ovary
100%
Lung
18%
Brain
5%
Liver
3%
Heart
0%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
TULP1AIPL1CRXGUCY2DIMPDH1RPGRIP1PCARE
PROTEIN STRUCTURE
Preparing viewer…
PDB3C5N Β· 1.80 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.02LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.81 [0.64–1.02]
RankingsWhere TULP1 stands among ~20K protein-coding genes
  • #9,154of 20,598
    Most Researched48
  • #507of 5,498
    Most Pathogenic Variants150 Β· top 10%
  • #9,990of 17,882
    Most Constrained (LOEUF)1.02
Genes detectedTULP1
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Comprehensive Molecular Screening in Chinese Usher Syndrome Patients.
PMID: 29625443
Invest Ophthalmol Vis Sci Β· 2018
1.00
2
PMID: 20301590
0.90
3
Phenotyping and genotyping inherited retinal diseases: Molecular genetics, clinical and imaging features, and therapeutics of macular dystrophies, cone and cone-rod dystrophies, rod-cone dystrophies, Leber congenital amaurosis, and cone dysfunction syndromes.
PMID: 38278208
Prog Retin Eye Res Β· 2024
0.80
4
Natural history and biomarkers of retinal dystrophy caused by the biallelic TULP1 variant c.148delG.
PMID: 36128853
Acta Ophthalmol Β· 2023
0.70
5
Cell-specific expression of tubby gene family members (tub, Tulp1,2, and 3) in the retina.
PMID: 10509669
Invest Ophthalmol Vis Sci Β· 1999
0.60