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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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EYS
EGF-like photoreceptor maintenance factor
Chromosome 6 Β· 6q12
NCBI Gene: 346007Ensembl: ENSG00000188107.15HGNC: HGNC:21555UniProt: Q5T1H1
73PubMed Papers
21Diseases
0Drugs
1,083Pathogenic Variants
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
skeletal muscle tissue regenerationcentrioledetection of light stimulus involved in visual perceptionextracellular exosomeretinitis pigmentosaretinitis pigmentosa 25Retinal dystrophyautosomal recessive retinitis pigmentosa
✦AI Summary

EYS encodes an EGF-like photoreceptor maintenance factor required for maintaining photoreceptor cell integrity and normal ciliary pocket morphology 1. By facilitating protein trafficking between photoreceptor inner and outer segments via the transition zone, EYS supports proper photoreceptor structure and function. Mutations in EYS cause retinitis pigmentosa 25 (RP25), an inherited retinal disease characterized by progressive photoreceptor degeneration. EYS is among the most frequently mutated genes in retinitis pigmentosa across multiple populations. In Japanese cohorts, EYS variants account for a substantial proportion of autosomal recessive RP cases, with specific founder mutations [p.(Ser1653fs) and p.(Tyr2935*)] and East Asian-specific variants identified 23. Genome-wide studies consistently rank EYS among the top three causative genes for inherited retinal diseases, alongside USH2A and RP1, explaining approximately 4% of cases in some populations 45. Copy number variations and single nucleotide variants in EYS contribute significantly to both solved and unsolved inherited retinal disease cases. Comprehensive genetic screening incorporating CNV analysis is essential for diagnosing EYS-associated retinal dystrophies 64.

Sources cited
1
EYS is required to maintain the integrity of photoreceptor cells and normal morphology of the photoreceptor ciliary pocket
PMID: 18836446
2
EYS variants, including founder mutations p.(Ser1653fs) and p.(Tyr2935*), and East Asian-specific variants cause retinitis pigmentosa in Japanese patients
PMID: 31213501
3
EYS is the most frequently mutated gene in inherited retinal disease pedigrees, primarily associated with autosomal recessive retinitis pigmentosa
PMID: 36284460
4
EYS pathogenic variants account for approximately 4% of inherited retinal degeneration cases; CNV detection increases diagnostic yield
PMID: 32037395
5
EYS is among the most common causative genes for inherited retinal disease across multiple populations, particularly for retinitis pigmentosa
PMID: 33691693
6
EYS variants are identified through targeted NGS and CNV analysis is important for IRD molecular genetic diagnostics
PMID: 30718709
Disease Associationsβ“˜21
retinitis pigmentosaOpen Targets
0.82Strong
retinitis pigmentosa 25Open Targets
0.67Moderate
Retinal dystrophyOpen Targets
0.67Moderate
autosomal recessive retinitis pigmentosaOpen Targets
0.52Moderate
alcohol drinkingOpen Targets
0.47Moderate
EYS-related retinopathyOpen Targets
0.46Moderate
Macular dystrophyOpen Targets
0.43Moderate
Cone rod dystrophyOpen Targets
0.39Weak
cone-rod dystrophyOpen Targets
0.38Weak
mathematical abilityOpen Targets
0.38Weak
inherited retinal dystrophyOpen Targets
0.37Weak
Abnormality of the skeletal systemOpen Targets
0.37Weak
male reproductive organ cancerOpen Targets
0.35Weak
self-injurious ideationOpen Targets
0.35Weak
esophageal diseaseOpen Targets
0.34Weak
Abnormality of the eyeOpen Targets
0.34Weak
central areolar choroidal dystrophyOpen Targets
0.34Weak
retinitis punctata albescensOpen Targets
0.33Weak
major depressive disorderOpen Targets
0.33Weak
schizophreniaOpen Targets
0.33Weak
Retinitis pigmentosa 25UniProt
Pathogenic Variants1,083
NM_001142800.2(EYS):c.5928-2A>GPathogenic
Retinitis pigmentosa|Retinitis pigmentosa 25|not provided|Retinal dystrophy
β˜…β˜…β˜†β˜†2026
NM_001142800.2(EYS):c.6416G>A (p.Cys2139Tyr)Pathogenic
not specified|not provided|Retinal dystrophy|Retinitis pigmentosa 25|Retinitis pigmentosa|EYS-related disorder
β˜…β˜…β˜†β˜†2026β†’ Residue 2139
NM_001142800.2(EYS):c.1335T>A (p.Cys445Ter)Pathogenic
Retinitis pigmentosa 25|not provided
β˜…β˜…β˜†β˜†2026β†’ Residue 445
NM_001142800.2(EYS):c.8133_8137del (p.Phe2712fs)Pathogenic
Retinitis pigmentosa 25|not provided|Retinal dystrophy
β˜…β˜…β˜†β˜†2026β†’ Residue 2712
NM_001142800.2(EYS):c.7229-1G>ALikely pathogenic
Retinitis pigmentosa 25|not provided
β˜…β˜…β˜†β˜†2026
NM_001142800.2(EYS):c.9286_9295del (p.Val3096fs)Pathogenic
Retinitis pigmentosa 25|not provided|Retinitis pigmentosa|Retinal dystrophy|EYS-related disorder
β˜…β˜…β˜†β˜†2026β†’ Residue 3096
NM_001142800.2(EYS):c.4350_4356del (p.Ile1451fs)Pathogenic
Retinitis pigmentosa 25|not provided|Retinitis pigmentosa|Retinal dystrophy
β˜…β˜…β˜†β˜†2026β†’ Residue 1451
NM_001142800.2(EYS):c.5644+5G>APathogenic
not provided|Retinitis pigmentosa 25
β˜…β˜…β˜†β˜†2026
NM_001142800.2(EYS):c.3443+1G>TPathogenic
Retinitis pigmentosa 25|not provided|Retinal dystrophy|Retinitis pigmentosa|EYS-related disorder
β˜…β˜…β˜†β˜†2026
NM_001142800.2(EYS):c.7228+1G>APathogenic
not provided|Retinitis pigmentosa|Retinitis pigmentosa 25|Retinal dystrophy
β˜…β˜…β˜†β˜†2026
NM_001142800.2(EYS):c.7492G>C (p.Ala2498Pro)Pathogenic
not provided|Retinitis pigmentosa 25|Retinal dystrophy|Retinitis pigmentosa
β˜…β˜…β˜†β˜†2026β†’ Residue 2498
NM_001142800.2(EYS):c.5868del (p.Phe1956fs)Pathogenic
Retinitis pigmentosa 25
β˜…β˜…β˜†β˜†2026β†’ Residue 1956
NM_001142800.2(EYS):c.6557G>A (p.Gly2186Glu)Pathogenic
Retinitis pigmentosa|Retinal dystrophy|not provided|Retinitis pigmentosa 25
β˜…β˜…β˜†β˜†2026β†’ Residue 2186
NM_001142800.2(EYS):c.2486del (p.Ile829fs)Pathogenic
not provided|Retinitis pigmentosa 25
β˜…β˜…β˜†β˜†2026β†’ Residue 829
NM_001142800.2(EYS):c.632G>T (p.Cys211Phe)Likely pathogenic
not provided|Retinitis pigmentosa 25
β˜…β˜…β˜†β˜†2026β†’ Residue 211
NM_001142800.2(EYS):c.525_527del (p.Glu176del)Pathogenic
not provided|Retinitis pigmentosa 25|Retinitis pigmentosa|Retinal dystrophy|EYS-related disorder
β˜…β˜…β˜†β˜†2026β†’ Residue 176
NM_001142800.2(EYS):c.4321C>T (p.Gln1441Ter)Pathogenic
not provided|Retinitis pigmentosa 25
β˜…β˜…β˜†β˜†2026β†’ Residue 1441
NM_001142800.2(EYS):c.7016del (p.Cys2339fs)Pathogenic
not provided|Retinitis pigmentosa 25
β˜…β˜…β˜†β˜†2026β†’ Residue 2339
NM_001142800.2(EYS):c.8659G>T (p.Gly2887Ter)Pathogenic
not provided|Retinitis pigmentosa 25
β˜…β˜…β˜†β˜†2026β†’ Residue 2887
NM_001142800.2(EYS):c.1211dup (p.Asn404fs)Pathogenic
Retinitis pigmentosa|not provided|Retinitis pigmentosa 25|Retinal dystrophy
β˜…β˜…β˜†β˜†2026β†’ Residue 404
View on ClinVar β†—
Related Genes
ABCA4Protein interaction86%CNGB1Protein interaction86%GUCA1BProtein interaction86%NRLProtein interaction86%PDE6AProtein interaction86%PDE6GProtein interaction86%
Tissue Expression6 tissues
Liver
100%
Brain
80%
Ovary
53%
Lung
41%
Heart
37%
Bone Marrow
26%
Gene Interaction Network
Click a node to explore
EYSABCA4CNGB1GUCA1BNRLPDE6APDE6G
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q5T1H1
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.96LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.85 [0.75–0.96]
RankingsWhere EYS stands among ~20K protein-coding genes
  • #6,459of 20,598
    Most Researched73
  • #29of 5,498
    Most Pathogenic Variants1,083 Β· top 1%
  • #9,048of 17,882
    Most Constrained (LOEUF)0.96
Genes detectedEYS
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Genetic characteristics of retinitis pigmentosa in 1204 Japanese patients.
PMID: 31213501
J Med Genet Β· 2019
1.00
2
Comprehensive Molecular Screening in Chinese Usher Syndrome Patients.
PMID: 29625443
Invest Ophthalmol Vis Sci Β· 2018
0.90
3
PMID: 20301590
0.80
4
Molecular genetic analysis using targeted NGS analysis of 677 individuals with retinal dystrophy.
PMID: 30718709
Sci Rep Β· 2019
0.70
5
Copy-number variation contributes 9% of pathogenicity in the inherited retinal degenerations.
PMID: 32037395
Genet Med Β· 2020
0.60