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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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VAMP5
vesicle associated membrane protein 5
Chromosome 2 · 2p11.2
NCBI Gene: 10791Ensembl: ENSG00000168899.6HGNC: HGNC:12646UniProt: O95183
25PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingcell surfaceextracellular exosomeorganelle membraneModerate albuminuriaprostate carcinomaadolescent idiopathic scoliosiscoronary artery disease
✦AI Summary

VAMP5 (vesicle-associated membrane protein 5) is a SNARE protein primarily functioning in exosome biogenesis and release through vesicular trafficking. As an R-SNARE localized to multivesicular bodies (MVBs), VAMP5 mediates MVB-plasma membrane fusion by interacting with Q-SNAREs including SNAP47, STX1, and STX4, enabling exosome secretion in both polarized and non-polarized cells 1. VAMP5 is post-translationally modified by S-palmitoylation, a reversible lipophilic modification regulating protein signaling 2. Beyond canonical exocytosis, VAMP5 functions as a cell-autonomous antiviral defense factor, localizing to double-membrane vesicles where it interacts with viral NSP8 to restrict coronavirus replication including SARS-CoV-2 and related pathogens 3. VAMP5 is highly expressed in embryonic stem cells and mesoderm, contributing to their inherent viral resistance 3. Clinical relevance includes associations with Hirschsprung disease susceptibility, particularly long-segment aganglionosis, through genetic polymorphisms (rs10206961, rs1254900) 4, and elevated expression as a diagnostic biomarker in tuberculosis (AUC 0.993) and nonalcoholic fatty liver disease-related hepatocellular carcinoma 56. VAMP5 is also released in extracellular vesicles by retinal Müller glia and responds to ischemic stress 7. VAMP5 shows no association with primary open-angle glaucoma in Dutch populations 8.

Sources cited
1
VAMP5 is an MVB-localized SNARE protein mediating exosome release through interaction with SNAP47 and plasma membrane SNAREs STX1/STX4
PMID: 37704453
2
VAMP5 (synaptobrevin) undergoes S-palmitoylation, a reversible lipophilic posttranslational modification
PMID: 39909380
3
VAMP5 functions as a cell-autonomous antiviral defense factor against SARS-CoV-2 and coronaviruses by localizing to DMVs and interacting with viral NSP8
PMID: 40624080
4
VAMP5 is highly expressed in embryonic stem cells and mesoderm, contributing to their inherent viral resistance
PMID: 40624080
5
VAMP5 genetic polymorphisms (rs10206961, rs1254900) are associated with increased Hirschsprung disease risk, particularly long-segment aganglionosis
PMID: 29695640
6
VAMP5 is upregulated in tuberculosis patients with excellent diagnostic performance (AUC 0.993) and functions in exosome biogenesis
PMID: 38674369
7
VAMP5 expression is increased in NAFLD-related hepatocellular carcinoma and correlates with immune cell profiles and prognosis
PMID: 40595076
8
VAMP5 is released in extracellular vesicles by retinal Müller glia and responds to ischemic stress
PMID: 36043482
9
VAMP5 and VAMP8 are not involved in primary open-angle glaucoma in Dutch populations
PMID: 16110299
Disease Associationsⓘ20
Moderate albuminuriaOpen Targets
0.21Weak
prostate carcinomaOpen Targets
0.20Weak
adolescent idiopathic scoliosisOpen Targets
0.18Weak
coronary artery diseaseOpen Targets
0.11Weak
myocardial infarctionOpen Targets
0.09Suggestive
angina pectorisOpen Targets
0.09Suggestive
Myocardial IschemiaOpen Targets
0.07Suggestive
viral diseaseOpen Targets
0.07Suggestive
heart failureOpen Targets
0.07Suggestive
congestive heart failureOpen Targets
0.07Suggestive
cardiovascular diseaseOpen Targets
0.06Suggestive
gliomaOpen Targets
0.06Suggestive
coronary atherosclerosisOpen Targets
0.05Suggestive
Congenital pulmonary alveolar proteinosisOpen Targets
0.05Suggestive
COVID-19Open Targets
0.05Suggestive
Neonatal acute respiratory distress with surfactant metabolism deficiencyOpen Targets
0.05Suggestive
cartilage diseaseOpen Targets
0.05Suggestive
Genetic renal or urinary tract malformationOpen Targets
0.05Suggestive
congenital hydronephrosisOpen Targets
0.05Suggestive
renal hypodysplasia/aplasia 4Open Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
STX6Protein interaction100%YKT6Protein interaction99%NAPAProtein interaction98%VTI1AProtein interaction94%STX5Protein interaction94%SNAP47Protein interaction91%
Tissue Expression6 tissues
Lung
100%
Heart
45%
Liver
43%
Ovary
32%
Bone Marrow
19%
Brain
14%
Gene Interaction Network
Click a node to explore
VAMP5STX6YKT6NAPAVTI1ASTX5SNAP47
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt O95183
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.67LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.01 [0.62–1.67]
RankingsWhere VAMP5 stands among ~20K protein-coding genes
  • #13,117of 20,598
    Most Researched25
  • #15,977of 17,882
    Most Constrained (LOEUF)1.67
Genes detectedVAMP5
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Topology-driven discovery of transmembrane protein S-palmitoylation.
PMID: 39909380
J Biol Chem · 2025
1.00
2
VAMP5 and distinct sets of cognate Q-SNAREs mediate exosome release.
PMID: 37704453
Cell Struct Funct · 2023
0.90
3
Vesicle-associated membrane protein 5 is an intrinsic defense factor for embryonic stem cells against coronaviruses.
PMID: 40624080
Nat Commun · 2025
0.80
4
Predictive effect and clinical diagnosis significance of exosome-related genes for nonalcoholic fatty liver disease-related hepatocellular carcinoma.
PMID: 40595076
Sci Rep · 2025
0.70
5
Exploring the Role of Extracellular Vesicles in the Pathogenesis of Tuberculosis.
PMID: 38674369
Genes (Basel) · 2024
0.60