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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
WDR35
WD repeat domain 35
Chromosome 2 Β· 2p24.1
NCBI Gene: 57539Ensembl: ENSG00000118965.17HGNC: HGNC:29250UniProt: Q9P2L0
50PubMed Papers
23Diseases
0Drugs
75Pathogenic Variants
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
intraciliary retrograde transportprotein carrier activityprotein bindingintraciliary anterograde transportcranioectodermal dysplasiaShort rib-polydactyly syndrome, Verma-Naumoff typeshort rib-polydactyly syndrome, Majewski typeshort-rib thoracic dysplasia 7/20 with polydactyly, digenic
✦AI Summary

WDR35 is a core component of the intraflagellar transport complex A (IFT-A), essential for retrograde ciliary transport and GPCR entry into cilia 1. It localizes to cilia and centrosomes and is required for ciliogenesis in both primary and motile cilia 12. WDR35 associates with the CCT chaperone complex and regulates subcellular localization of acetylated tubulin in primary cilia through interactions with TCP1 and RagA proteins 3. Loss of WDR35 impairs ciliary protein trafficking and triggers TGFΞ²-ECM-integrin signaling that drives polycystic liver disease progression 4. Biallelic WDR35 mutations cause autosomal recessive ciliopathies including cranioectodermal dysplasia (CED/Sensenbrenner syndrome) and short-rib polydactyly syndromes 156. CED patients present with craniofacial dysmorphisms, skeletal deformities, growth retardation, ectodermal abnormalities, and organ involvement including nephronophthisis and hepatic fibrosis 52. WDR35 mutations also cause airway mucociliary clearance defects through disrupted motile cilia formation 2. High WDR35 expression in lung adenocarcinoma correlates with improved chemotherapy sensitivity and better overall survival, suggesting potential prognostic value 7.

Sources cited
1
WDR35 localizes to cilia and centrosomes; WDR35 deficiency prevents cilia formation; mutations cause short-rib polydactyly syndrome
PMID: 21473986
2
WDR35 variants cause cranioectodermal dysplasia with facial dysmorphisms, skeletal deformities, growth retardation, organ involvement
PMID: 37596520
3
WDR35 associates with CCT complex proteins and RagA; involved in subcellular localization of acetylated tubulin in primary cilia
PMID: 33610917
4
WDR35 deletion triggers TGFΞ²-ECM-integrin signaling driving polycystic liver disease through biliary epithelial cilia loss
PMID: 37703354
5
WDR35 mutations disrupt both primary and motile cilia formation in airway epithelium, causing mucociliary clearance defects
PMID: 25914204
6
Biallelic WDR35 mutations cause Sensenbrenner syndrome (cranioectodermal dysplasia) with nephronophthisis and skeletal abnormalities
PMID: 29134781
7
High WDR35 expression in lung adenocarcinoma correlates with chemotherapy sensitivity and better overall survival
PMID: 40548870
Disease Associationsβ“˜23
cranioectodermal dysplasiaOpen Targets
0.83Strong
Short rib-polydactyly syndrome, Verma-Naumoff typeOpen Targets
0.82Strong
short rib-polydactyly syndrome, Majewski typeOpen Targets
0.57Moderate
short-rib thoracic dysplasia 7/20 with polydactyly, digenicOpen Targets
0.50Moderate
Jeune syndromeOpen Targets
0.48Moderate
short rib-polydactyly syndromeOpen Targets
0.38Weak
genetic disorderOpen Targets
0.38Weak
Ellis-van Creveld syndromeOpen Targets
0.30Weak
Abnormality of the skeletal systemOpen Targets
0.30Weak
Ellis Van Creveld syndromeOpen Targets
0.30Weak
frozen shoulderOpen Targets
0.29Weak
connective tissue diseaseOpen Targets
0.22Weak
Syndactyly type 2Open Targets
0.07Suggestive
syndactyly type 4Open Targets
0.06Suggestive
polydactyly of a triphalangeal thumbOpen Targets
0.06Suggestive
synpolydactyly type 1Open Targets
0.06Suggestive
Split hand-split foot malformationOpen Targets
0.05Suggestive
mesoaxial synostotic syndactyly with phalangeal reductionOpen Targets
0.05Suggestive
syndactyly type 5Open Targets
0.05Suggestive
symphalangism with multiple anomalies of hands and feetOpen Targets
0.05Suggestive
Cranioectodermal dysplasia 2UniProt
Short-rib thoracic dysplasia 7 with or without polydactylyUniProt
Short-rib thoracic dysplasia 7/20 with polydactyly, digenicUniProt
Pathogenic Variants75
NM_020779.4(WDR35):c.1889T>G (p.Leu630Ter)Pathogenic
Cranioectodermal dysplasia 2|WDR35-related disorder|Jeune thoracic dystrophy|Short-rib thoracic dysplasia 7 with or without polydactyly;Cranioectodermal dysplasia 2|Cranioectodermal dysplasia|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 630
NM_020779.4(WDR35):c.524del (p.Met175fs)Pathogenic
WDR35-related disorder|Cranioectodermal dysplasia 2;Short-rib thoracic dysplasia 7 with or without polydactyly
β˜…β˜…β˜†β˜†2024β†’ Residue 175
NM_020779.4(WDR35):c.1690C>T (p.Arg564Ter)Pathogenic
Cranioectodermal dysplasia 2;Short-rib thoracic dysplasia 7 with or without polydactyly|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 564
NM_020779.4(WDR35):c.1362del (p.Asn455fs)Likely pathogenic
not provided|Cranioectodermal dysplasia 2;Short-rib thoracic dysplasia 7 with or without polydactyly
β˜…β˜…β˜†β˜†2024β†’ Residue 455
NM_020779.4(WDR35):c.2415-2A>GLikely pathogenic
Cranioectodermal dysplasia 2;Short-rib thoracic dysplasia 7 with or without polydactyly|not provided
β˜…β˜…β˜†β˜†2024
NM_020779.4(WDR35):c.584_585del (p.Leu195fs)Pathogenic
not provided|Short-rib thoracic dysplasia 7 with or without polydactyly;Cranioectodermal dysplasia 2
β˜…β˜…β˜†β˜†2024β†’ Residue 195
NM_020779.4(WDR35):c.136C>T (p.Gln46Ter)Pathogenic
Short-rib thoracic dysplasia 7 with or without polydactyly;Cranioectodermal dysplasia 2
β˜…β˜…β˜†β˜†2024β†’ Residue 46
NM_020779.4(WDR35):c.1468del (p.Gln490fs)Pathogenic
not provided|SHORT-RIB THORACIC DYSPLASIA 7 WITHOUT POLYDACTYLY|Short rib-polydactyly syndrome|Short-rib thoracic dysplasia 7 with or without polydactyly;Cranioectodermal dysplasia 2
β˜…β˜…β˜†β˜†2024β†’ Residue 490
NM_020779.4(WDR35):c.2976del (p.Leu993fs)Pathogenic
Cranioectodermal dysplasia 2;Short-rib thoracic dysplasia 7 with or without polydactyly
β˜…β˜…β˜†β˜†2024β†’ Residue 993
NM_020779.4(WDR35):c.1255+1G>APathogenic
not provided|Short-rib thoracic dysplasia 7 with or without polydactyly;Cranioectodermal dysplasia 2
β˜…β˜…β˜†β˜†2024
NM_020779.4(WDR35):c.994C>T (p.Arg332Ter)Pathogenic
Cranioectodermal dysplasia 2;Short-rib thoracic dysplasia 7 with or without polydactyly|WDR35-related disorder
β˜…β˜…β˜†β˜†2024β†’ Residue 332
NM_020779.4(WDR35):c.206G>A (p.Gly69Asp)Pathogenic
Short-rib thoracic dysplasia 6 with or without polydactyly|Cranioectodermal dysplasia 2|Short-rib thoracic dysplasia 7 with or without polydactyly|WDR35-related disorder|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 69
NM_020779.4(WDR35):c.3345G>A (p.Leu1115=)Pathogenic
Cranioectodermal dysplasia 2;Short-rib thoracic dysplasia 7 with or without polydactyly|Cranioectodermal dysplasia 2
β˜…β˜…β˜†β˜†2023β†’ Residue 1115
NM_020779.4(WDR35):c.721_727del (p.His241fs)Pathogenic
Short-rib thoracic dysplasia 7 with or without polydactyly;Cranioectodermal dysplasia 2
β˜…β˜†β˜†β˜†2025β†’ Residue 241
NM_020779.4(WDR35):c.337C>T (p.Arg113Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 113
NM_020779.4(WDR35):c.1525-2_1527dupPathogenic
Cranioectodermal dysplasia 2;Short-rib thoracic dysplasia 7 with or without polydactyly
β˜…β˜†β˜†β˜†2025
NM_020779.4(WDR35):c.1694_1695dup (p.Thr566Ter)Pathogenic
Cranioectodermal dysplasia 2;Short-rib thoracic dysplasia 7 with or without polydactyly
β˜…β˜†β˜†β˜†2025β†’ Residue 566
NM_020779.4(WDR35):c.2306G>A (p.Trp769Ter)Pathogenic
Short-rib thoracic dysplasia 7 with or without polydactyly;Cranioectodermal dysplasia 2
β˜…β˜†β˜†β˜†2025β†’ Residue 769
NM_020779.4(WDR35):c.1714C>T (p.Gln572Ter)Pathogenic
Short-rib thoracic dysplasia 7 with or without polydactyly;Cranioectodermal dysplasia 2
β˜…β˜†β˜†β˜†2025β†’ Residue 572
NM_020779.4(WDR35):c.2956del (p.Ser986fs)Pathogenic
Short-rib thoracic dysplasia 7 with or without polydactyly;Cranioectodermal dysplasia 2
β˜…β˜†β˜†β˜†2025β†’ Residue 986
View on ClinVar β†—
Related Genes
IFT22Protein interaction100%IFTAPProtein interaction100%IFT80Protein interaction99%CRKProtein interaction98%DOCK1Protein interaction98%ELMO1Protein interaction98%
Tissue Expression6 tissues
Ovary
100%
Brain
81%
Bone Marrow
54%
Heart
54%
Lung
34%
Liver
20%
Gene Interaction Network
Click a node to explore
WDR35IFT22IFTAPIFT80CRKDOCK1ELMO1
PROTEIN STRUCTURE
Preparing viewer…
PDB8BBE Β· 3.50 Γ… Β· EM
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.78LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.66 [0.56–0.78]
RankingsWhere WDR35 stands among ~20K protein-coding genes
  • #8,896of 20,598
    Most Researched50
  • #984of 5,498
    Most Pathogenic Variants75 Β· top quartile
  • #6,327of 17,882
    Most Constrained (LOEUF)0.78
Genes detectedWDR35
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
PMID: 24027799
1.00
2
Human and mouse mutations in WDR35 cause short-rib polydactyly syndromes due to abnormal ciliogenesis.
PMID: 21473986
Am J Hum Genet Β· 2011
0.90
3
Novel compound heterozygous WDR35 variants in a Chinese patient associated with cranioectodermal dysplasia and ectopic testis: a case report and review of the literature.
PMID: 37596520
BMC Pediatr Β· 2023
0.80
4
A TGFΞ²-ECM-integrin signaling axis drives structural reconfiguration of the bile duct to promote polycystic liver disease.
PMID: 37703354
Sci Transl Med Β· 2023
0.70
5
WDR35 is involved in subcellular localization of acetylated tubulin in 293T cells.
PMID: 33610917
Biochem Biophys Res Commun Β· 2021
0.60