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GeneE
25 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
XDH
xanthine dehydrogenase
Chromosome 2 Β· 2p23.1
NCBI Gene: 7498Ensembl: ENSG00000158125.11HGNC: HGNC:12805UniProt: P47989
166PubMed Papers
21Diseases
6Drugs
52Pathogenic Variants
RESEARCH IMPACT
TrendingVariant-Rich
CLINICAL
FDA Approved TargetOMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
xanthine dehydrogenase activityxanthine oxidase activityprotein bindingprotein homodimerization activityxanthinuria type Igoutleukemialymphoma
✦AI Summary

Xanthine dehydrogenase (XDH) is a rate-limiting enzyme in purine catabolism that catalyzes the sequential oxidation of hypoxanthine to xanthine and then to uric acid 1. As part of the xanthine oxidoreductase (XOR) enzyme complex, XDH functions primarily through NAD+-dependent oxidation, distinguishing it from the oxygen-dependent xanthine oxidase form 2. Beyond purine metabolism, XDH contributes to reactive oxygen species generation and participates in nitrite reduction and other metabolic processes 1. XDH plays important roles in both physiological and pathological contexts. In hepatocellular carcinoma, XDH loss in tumor-associated macrophages promotes immunosuppressive M2 polarization through the XOR-IDH3Ξ± axis, enhancing CD8+ T-cell exhaustion 3. In intrahepatic cholangiocarcinoma, elevated XDH supports EGFR tyrosine kinase inhibitor resistance by promoting EGFR stability and DNA damage repair 4. Additionally, fatty acid oxidation-induced HIF-1Ξ± activation upregulates XDH to facilitate hepatic urate synthesis in dyslipidemia-associated hyperuricemia 5. Clinically, XDH dysfunction causes xanthinuria type 1, a rare metabolic disorder. XDH inhibition via drugs like allopurinol is the primary treatment for gout and hyperuricemia 2. Genetic variants in XDH (rs2295475) interact with NUDT15 polymorphisms to predict azathioprine-induced leukopenia risk 6, highlighting pharmacogenetic relevance.

Sources cited
1
XDH catalyzes hypoxanthine to uric acid conversion; XOR has multiple physiological activities including ROS generation and nitrite reductase activity
PMID: 33578127
2
XDH uses NAD+ for oxidation and can be converted to XO under ischemia/hypoxia; both catalyze purine catabolism but XDH is initially synthesized
PMID: 32789757
3
XDH loss in monocyte-derived macrophages promotes M2 polarization and CD8+ T-cell exhaustion in hepatocellular carcinoma through IDH3Ξ± interaction
PMID: 37473847
4
XDH is upregulated in intrahepatic cholangiocarcinoma and promotes EGFR TKI resistance through USP8-mediated deubiquitination and MUC1 upregulation
PMID: 40759200
5
FAO-induced HIF-1Ξ± activation upregulates XDH to facilitate hepatic urate synthesis in dyslipidemia-associated hyperuricemia
PMID: 39872146
6
XDH rs2295475 is a risk factor for azathioprine-induced myelotoxicity and interacts with NUDT15 rs116855232 to predict leukopenia
PMID: 35916133
7
XDH is a rate-limiting enzyme in oxidative purine metabolism and plays a key role in ischemia-reperfusion injury, viral pneumonia, and renal failure
PMID: 8661045
Disease Associationsβ“˜21
xanthinuria type IOpen Targets
0.76Strong
goutOpen Targets
0.72Strong
leukemiaOpen Targets
0.60Moderate
lymphomaOpen Targets
0.60Moderate
hyperuricemiaOpen Targets
0.59Moderate
xanthinuria type IIOpen Targets
0.56Moderate
cancerOpen Targets
0.46Moderate
MyalgiaOpen Targets
0.37Weak
ArthralgiaOpen Targets
0.37Weak
eye inflammationOpen Targets
0.37Weak
cardiovascular diseaseOpen Targets
0.37Weak
Tumor Lysis SyndromeOpen Targets
0.36Weak
benign soft tissue neoplasmOpen Targets
0.32Weak
ovarian dysfunctionOpen Targets
0.32Weak
type 2 diabetes mellitusOpen Targets
0.30Weak
EncephalopathyOpen Targets
0.26Weak
injuryOpen Targets
0.26Weak
ovarian neoplasmOpen Targets
0.26Weak
bipolar disorderOpen Targets
0.26Weak
sprainOpen Targets
0.26Weak
Xanthinuria 1UniProt
Pathogenic Variants52
NM_000379.4(XDH):c.2274del (p.Glu760fs)Pathogenic
Xanthinuria type II|Hereditary xanthinuria type 1
β˜…β˜…β˜†β˜†2026β†’ Residue 760
NM_000379.4(XDH):c.641del (p.Pro214fs)Pathogenic
Xanthinuria type II|Hereditary xanthinuria type 1
β˜…β˜…β˜†β˜†2026β†’ Residue 214
NM_000379.4(XDH):c.140dup (p.Cys48fs)Pathogenic
Xanthinuria type II|Hereditary xanthinuria type 1
β˜…β˜…β˜†β˜†2025β†’ Residue 48
NM_000379.4(XDH):c.2164A>T (p.Lys722Ter)Pathogenic
Xanthinuria type II|Hereditary xanthinuria type 1
β˜…β˜…β˜†β˜†2025β†’ Residue 722
NM_000379.4(XDH):c.1602+1G>ALikely pathogenic
Xanthinuria type II|Hereditary xanthinuria type 1
β˜…β˜…β˜†β˜†2025
NM_000379.4(XDH):c.682C>T (p.Arg228Ter)Pathogenic
Hereditary xanthinuria type 1|Xanthinuria type II
β˜…β˜…β˜†β˜†2025β†’ Residue 228
NM_000379.4(XDH):c.565-1G>ALikely pathogenic
Xanthinuria type II|Hereditary xanthinuria type 1
β˜…β˜…β˜†β˜†2025
NM_000379.4(XDH):c.2890dup (p.Thr964fs)Pathogenic
Hereditary xanthinuria type 1|Xanthinuria type II
β˜…β˜…β˜†β˜†2024β†’ Residue 964
NM_000379.4(XDH):c.2473C>T (p.Arg825Ter)Pathogenic
Xanthinuria type II|Hereditary xanthinuria type 1
β˜…β˜…β˜†β˜†2024β†’ Residue 825
NM_000379.4(XDH):c.3847C>T (p.Arg1283Ter)Pathogenic
Xanthinuria type II|not provided
β˜…β˜…β˜†β˜†2023β†’ Residue 1283
NM_000379.4(XDH):c.751C>T (p.Gln251Ter)Pathogenic
Xanthinuria type II|Hereditary xanthinuria type 1
β˜…β˜…β˜†β˜†2023β†’ Residue 251
NM_000379.4(XDH):c.1418_1424dup (p.Lys476fs)Pathogenic
Xanthinuria type II
β˜…β˜†β˜†β˜†2025β†’ Residue 476
NM_000379.4(XDH):c.598G>T (p.Glu200Ter)Pathogenic
Xanthinuria type II
β˜…β˜†β˜†β˜†2024β†’ Residue 200
NM_000379.4(XDH):c.887-1G>ALikely pathogenic
Xanthinuria type II
β˜…β˜†β˜†β˜†2024
NM_000379.4(XDH):c.887-1G>TLikely pathogenic
Hereditary xanthinuria type 1
β˜…β˜†β˜†β˜†2024
NM_000379.4(XDH):c.1885del (p.Val629fs)Likely pathogenic
Hereditary xanthinuria type 1
β˜…β˜†β˜†β˜†2024β†’ Residue 629
NM_000379.4(XDH):c.887-2A>GLikely pathogenic
Hereditary xanthinuria type 1
β˜…β˜†β˜†β˜†2024
NM_000379.4(XDH):c.1242_1242+6delLikely pathogenic
Hereditary xanthinuria type 1
β˜…β˜†β˜†β˜†2024
NM_000379.4(XDH):c.3774+2T>ALikely pathogenic
Hereditary xanthinuria type 1
β˜…β˜†β˜†β˜†2024
NM_000379.4(XDH):c.2371C>T (p.Arg791Ter)Likely pathogenic
Hereditary xanthinuria type 1
β˜…β˜†β˜†β˜†2024β†’ Residue 791
View on ClinVar β†—
Drug Targets6
ALLOPURINOLApproved
Xanthine dehydrogenase inhibitor
leukemia
ALLOPURINOL SODIUMPhase III
Xanthine dehydrogenase inhibitor
BENDAZACApproved
Xanthine dehydrogenase inhibitor
Myalgia
FEBUXOSTATApproved
Xanthine dehydrogenase inhibitor
OXYPURINOLPhase II/III
Xanthine dehydrogenase inhibitor
heart failure
TOPIROXOSTATApproved
Xanthine dehydrogenase inhibitor
hyperuricemia
Related Genes
PLIN2Protein interaction100%BTN1A1Protein interaction100%NCF1Protein interaction100%NOX1Protein interaction100%GPX8Protein interaction100%GPX6Protein interaction100%
Tissue Expression6 tissues
Liver
100%
Lung
0%
Brain
0%
Ovary
0%
Heart
0%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
XDHPLIN2BTN1A1NCF1NOX1GPX8GPX6
PROTEIN STRUCTURE
Preparing viewer…
PDB2E1Q Β· 2.60 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.99LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.86 [0.75–0.99]
RankingsWhere XDH stands among ~20K protein-coding genes
  • #2,702of 20,598
    Most Researched166 Β· top quartile
  • #404of 1,025
    FDA-Approved Drug Targets4
  • #1,289of 5,498
    Most Pathogenic Variants52 Β· top quartile
  • #9,498of 17,882
    Most Constrained (LOEUF)0.99
Genes detectedXDH
Sources retrieved25 papers
Response timeβ€”
πŸ“„ Sources
25β–Ό
1
Xanthine oxidoreductase: One enzyme for multiple physiological tasks.
PMID: 33578127
Redox Biol Β· 2021
1.00
2
The XOR-IDH3Ξ± axis controls macrophage polarization in hepatocellular carcinoma.
PMID: 37473847
J Hepatol Β· 2023
0.90
3
Xanthine Oxidoreductase Inhibitors.
PMID: 32789757
Handb Exp Pharmacol Β· 2021
0.80
4
Metabolic enzyme PFKFB4 activates transcriptional coactivator SRC-3 to drive breast cancer.
PMID: 29615789
Nature Β· 2018
0.70
5
Mosquito Gut Microbiota: A Review.
PMID: 39204291
Pathogens Β· 2024
0.64