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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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ALKBH2
alkB homolog 2, alpha-ketoglutarate dependent dioxygenase
Chromosome 12 · 12q24.11
NCBI Gene: 121642Ensembl: ENSG00000189046.12HGNC: HGNC:32487UniProt: Q6NS38
49PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
DNA Repair
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nucleoplasmnucleolusferrous iron bindingprotein bindinghyper-IgM syndrome type 5colorectal carcinomaFRAXF syndromemosaic variegated aneuploidy syndrome 4
✦AI Summary

ALKBH2 is a DNA repair enzyme that catalyzes the direct reversal of alkylated nucleic acid bases through oxidative dealkylation 1. The enzyme functions as a dioxygenase, using molecular oxygen, 2-oxoglutarate, and iron as cofactors to oxidize alkyl groups, which are subsequently released as aldehydes, thereby regenerating undamaged bases 1. ALKBH2 demonstrates substrate specificity for monoalkylated bases, particularly N1-methyladenine and N3-methylcytosine, and can repair higher-order alkyl adducts including etheno adducts 1. The enzyme shows strong preference for double-stranded DNA substrates and acts by probing base pair stability, locating weakened base pairs, and flipping damaged bases into its active site for catalysis. ALKBH2 plays a critical role in cellular resistance to alkylating agents, with deficiencies rendering cells more sensitive to methylating chemotherapy 2. Clinically, ALKBH2 is relevant in cancer biology, where its overexpression contributes to chemotherapy resistance 3. The enzyme's expression is dynamically regulated in viral infections, being suppressed in HTLV-1 carriers but restored in acute T-cell leukemia patients 4. Germline variants in ALKBH2 have been associated with early-onset lung adenocarcinoma risk, particularly in Asian populations 5. The enzyme can be stabilized by USP7, which prevents its proteasomal degradation and contributes to temozolomide resistance in glioblastoma 6.

Sources cited
1
ALKBH2 catalyzes direct reversal of alkylated DNA bases and repairs N3-ethylthymidine lesions
PMID: 26930515
2
ALKBH2 deficiency increases cellular sensitivity to methylating agents
PMID: 38925328
3
ALKBH2 overexpression contributes to chemotherapy resistance in cancers
PMID: 39094381
4
ALKBH2 expression is dynamically regulated in HTLV-1 infection and T-cell leukemia
PMID: 39633427
5
Germline ALKBH2 variants are associated with early-onset lung adenocarcinoma risk
PMID: 40516820
6
USP7 stabilizes ALKBH2 and contributes to temozolomide resistance in glioblastoma
PMID: 40835840
Disease Associationsⓘ20
hyper-IgM syndrome type 5Open Targets
0.49Moderate
colorectal carcinomaOpen Targets
0.07Suggestive
FRAXF syndromeOpen Targets
0.05Suggestive
mosaic variegated aneuploidy syndrome 4Open Targets
0.05Suggestive
glioblastoma multiformeOpen Targets
0.04Suggestive
cervical carcinomaOpen Targets
0.03Suggestive
urinary bladder carcinomaOpen Targets
0.03Suggestive
food allergyOpen Targets
0.02Suggestive
glioblastomaOpen Targets
0.02Suggestive
lung adenocarcinomaOpen Targets
0.02Suggestive
non-small cell lung carcinomaOpen Targets
0.01Suggestive
breast cancerOpen Targets
0.01Suggestive
neoplasmOpen Targets
0.01Suggestive
carcinomaOpen Targets
0.01Suggestive
cancerOpen Targets
0.01Suggestive
systemic juvenile idiopathic arthritisOpen Targets
0.01Suggestive
Lyme diseaseOpen Targets
0.01Suggestive
urothelial carcinomaOpen Targets
0.01Suggestive
lymphomaOpen Targets
0.01Suggestive
lung cancerOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ALKBH4Protein interaction99%JMJD4Protein interaction99%ALKBH7Protein interaction99%ALKBH6Protein interaction99%ALKBH8Protein interaction99%ALKBH1Protein interaction69%
Tissue Expression6 tissues
Liver
100%
Ovary
74%
Brain
52%
Lung
43%
Heart
41%
Bone Marrow
30%
Gene Interaction Network
Click a node to explore
ALKBH2ALKBH4JMJD4ALKBH7ALKBH6ALKBH8ALKBH1
PROTEIN STRUCTURE
Preparing viewer…
PDB3S57 · 1.60 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.39LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.95 [0.66–1.39]
RankingsWhere ALKBH2 stands among ~20K protein-coding genes
  • #8,907of 20,598
    Most Researched49
  • #14,432of 17,882
    Most Constrained (LOEUF)1.39
Genes detectedALKBH2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Evaluation of ALKBH2 and ALKBH3 gene regulation in patients with adult T-cell leukemia/lymphoma.
PMID: 39633427
Virol J · 2024
1.00
2
Nicotinamide mononucleotide supplementation improves oocyte developmental competence in different ovarian damage conditions.
PMID: 39923879
Am J Obstet Gynecol · 2025
0.90
3
Interactions between HIV protease inhibitor ritonavir and human DNA repair enzyme ALKBH2: a molecular dynamics simulation study.
PMID: 35543797
Mol Divers · 2023
0.80
4
Genomic Profiles of Pathogenic and Moderate-Penetrance Germline Variants Associated With Risk of Early-Onset Lung Adenocarcinoma.
PMID: 40516820
J Thorac Oncol · 2025
0.70
5
Roles of Aag, Alkbh2, and Alkbh3 in the Repair of Carboxymethylated and Ethylated Thymidine Lesions.
PMID: 26930515
ACS Chem Biol · 2016
0.60