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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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ALKBH7
alkB homolog 7, RNA demethylase
Chromosome 19 · 19p13.3
NCBI Gene: 84266Ensembl: ENSG00000125652.9HGNC: HGNC:21306UniProt: Q9BT30
20PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
regulation of mitochondrial membrane permeability involved in programmed necrotic cell deathmitochondrial matrixoxidative RNA demethylase activitytRNA demethylase activitycancerneoplasmglioblastomabreast cancer
✦AI Summary

ALKBH7 is a mitochondrial RNA demethylase that regulates mitochondrial gene expression through removal of N2,N2-dimethylguanosine (m22G) and N1-methyladenosine (m1A) from nascent polycistronic mitochondrial pre-tRNA regions 1. This demethylation activity controls the processing and structural dynamics of mitochondrial RNA, influencing steady-state tRNA levels, protein translation, and overall mitochondrial activity 1. ALKBH7 possesses a conserved iron-coordinating double-stranded β-helix fold characteristic of α-ketoglutarate-dependent dioxygenases, but uniquely lacks the nucleotide-recognition domains found in other AlkB family members, suggesting potential protein substrate specificity 2. Beyond its RNA demethylase function, ALKBH7 plays a critical role in programmed necrosis induced by DNA damage. Following severe alkylation or oxidative stress, ALKBH7 triggers mitochondrial membrane potential collapse and loss of mitochondrial function, leading to NAD+ and ATP depletion and subsequent cell death 3. This response exhibits tissue and sex-specific patterns, with male organisms showing enhanced sensitivity 4. Depletion of ALKBH7 suppresses necrotic cell death while maintaining mitochondrial bioenergetics 3, making it a potential therapeutic target for diseases involving excessive cell death. Clinically, ALKBH7 dysregulation associates with inflammatory diseases and cancer. HIF-1α-mediated ALKBH7 downregulation drives mitochondrial damage and fibroblast activation in rheumatoid arthritis 5, while ALKBH7-NLRP3 co-expression correlates with breast cancer aggressiveness and immunometabolic profiles 6.

Sources cited
1
ALKBH7 demethylates m22G and m1A within mitochondrial pre-tRNA regions and regulates polycistronic mitochondrial RNA processing, affecting tRNA levels, protein translation, and mitochondrial activity
PMID: 34253897
2
ALKBH7 is required for alkylation and oxidation-induced programmed necrosis by triggering mitochondrial membrane potential collapse and energy depletion
PMID: 23666923
3
ALKBH7 possesses an iron-coordinating double-stranded β-helix fold and lacks nucleotide-recognition domains, suggesting protein rather than nucleic acid substrate specificity
PMID: 25122757
4
ALKBH7 mediates alkylation-induced necrosis through tissue and sex-specific mechanisms, conferring protection in ALKBH7-deficient male mice
PMID: 28726787
5
HIF-1α downregulates ALKBH7 expression in rheumatoid arthritis, promoting mitochondrial damage and fibroblast-like synoviocyte activation via cGAS-STING signaling
PMID: 40140527
6
ALKBH7 and NLRP3 show strong co-expression correlating with breast cancer subtype aggressiveness and may function in metabolic adaptation and immune signaling
PMID: 41373809
7
Suppression of ALKBH7 rescues TDP-43 deficiency-induced mitochondrion-dependent necroptosis and intestinal inflammation by maintaining NAD+ and ATP levels
PMID: 38157451
Disease Associationsⓘ20
cancerOpen Targets
0.09Suggestive
neoplasmOpen Targets
0.09Suggestive
glioblastomaOpen Targets
0.07Suggestive
breast cancerOpen Targets
0.04Suggestive
hyperinsulinism due to HNF1A deficiencyOpen Targets
0.04Suggestive
obesity due to melanocortin 4 receptor deficiencyOpen Targets
0.04Suggestive
autosomal dominant hyperinsulinism due to SUR1 deficiencyOpen Targets
0.04Suggestive
autosomal dominant hyperinsulinism due to Kir6.2 deficiencyOpen Targets
0.03Suggestive
hyperinsulinism due to UCP2 deficiencyOpen Targets
0.03Suggestive
lipodystrophy, congenital generalized, type 5Open Targets
0.03Suggestive
obesity due to pro-opiomelanocortin deficiencyOpen Targets
0.03Suggestive
obesity due to prohormone convertase I deficiencyOpen Targets
0.03Suggestive
CIDEC-related familial partial lipodystrophyOpen Targets
0.03Suggestive
LIPE-related familial partial lipodystrophyOpen Targets
0.03Suggestive
PPARG-related familial partial lipodystrophyOpen Targets
0.03Suggestive
familial partial lipodystrophy, Kobberling typeOpen Targets
0.03Suggestive
Familial partial lipodystrophy, Köbberling typeOpen Targets
0.03Suggestive
AKT2-related familial partial lipodystrophyOpen Targets
0.03Suggestive
Familial partial lipodystrophy due to AKT2 mutationsOpen Targets
0.03Suggestive
pancreatic adenocarcinomaOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ALKBH2Protein interaction99%ALKBH6Protein interaction95%ALKBH8Protein interaction95%ALKBH1Protein interaction95%ALKBH4Protein interaction95%JMJD4Protein interaction95%
Tissue Expression6 tissues
Liver
100%
Ovary
50%
Heart
38%
Lung
32%
Brain
25%
Bone Marrow
17%
Gene Interaction Network
Click a node to explore
ALKBH7ALKBH2ALKBH6ALKBH8ALKBH1ALKBH4JMJD4
PROTEIN STRUCTURE
Preparing viewer…
PDB4QKD · 1.35 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.68LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.19 [0.86–1.68]
RankingsWhere ALKBH7 stands among ~20K protein-coding genes
  • #14,098of 20,598
    Most Researched20
  • #16,003of 17,882
    Most Constrained (LOEUF)1.68
Genes detectedALKBH7
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
ALKBH7-mediated demethylation regulates mitochondrial polycistronic RNA processing.
PMID: 34253897
Nat Cell Biol · 2021
1.00
2
Excessive nucleic acid R-loops induce mitochondria-dependent epithelial cell necroptosis and drive spontaneous intestinal inflammation.
PMID: 38157451
Proc Natl Acad Sci U S A · 2024
0.90
3
Human ALKBH7 is required for alkylation and oxidation-induced programmed necrosis.
PMID: 23666923
Genes Dev · 2013
0.80
4
ALKBH7 and NLRP3 Co-Expression: A Potential Prognostic and Immunometabolic Marker Set in Breast Cancer Subtypes.
PMID: 41373809
Int J Mol Sci · 2025
0.70
5
The atomic resolution structure of human AlkB homolog 7 (ALKBH7), a key protein for programmed necrosis and fat metabolism.
PMID: 25122757
J Biol Chem · 2014
0.60