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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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ARMCX3
armadillo repeat containing X-linked 3
Chromosome X · Xq22.1
NCBI Gene: 51566Ensembl: ENSG00000102401.21HGNC: HGNC:24065UniProt: Q9UH62
64PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
mitochondrionprotein bindingaxonal transport of mitochondrioncytosolhepatocellular carcinomaneoplasmobesitynon-alcoholic fatty liver disease
✦AI Summary

ARMCX3 is an X-linked armadillo repeat-containing protein that functions as a key regulator of mitochondrial dynamics and neuronal metabolism. Mechanistically, ARMCX3 localizes to mitochondria and regulates mitochondrial trafficking in neurons by interacting with the Kinesin/Miro/Trak2 motor complex in a calcium-dependent manner 1. The protein controls mitochondrial aggregation and transport along axons, linking mitochondria to molecular motor systems essential for neuronal energy supply 1. Beyond mitochondrial function, ARMCX3 regulates reactive oxygen species (ROS) signaling in dental pulp stem cells and acts as a negative regulator of adipose tissue browning, suppressing thermogenic gene expression and mitochondrial oxidative activity 23. Clinically, ARMCX3 shows relevance to multiple disease states. Rare variants in ARMCX3 are associated with sleep-disordered breathing phenotypes 4, and the gene functions as a crosstalk factor linking periodontitis and osteoporosis through pyroptosis-related pathways and MAPK signaling 5. ARMCX3 expression is elevated in drug-induced senescent melanoma cells, suggesting potential therapeutic targeting 6. Additionally, viral pathogens exploit ARMCX3 regulation; Epstein-Barr virus-encoded non-coding RNAs downregulate ARMCX3 mRNA to facilitate viral replication 7. DNA methylation changes in ARMCX3 are associated with metabolic dysfunction in low birth weight individuals 8.

Sources cited
1
ARMCX3 interacts with Kinesin/Miro/Trak2 complex in calcium-dependent manner and regulates mitochondrial trafficking in neurons
PMID: 22569362
2
ARMCX3 is a negative regulator of adipose tissue browning and thermogenic gene expression; expression inversely correlates with obesity markers
PMID: 35705702
3
ARMCX3 regulates ROS signaling and affects neural differentiation in dental pulp stem cells
PMID: 39296219
4
Rare variants in ARMCX3 are associated with sleep-disordered breathing phenotypes in whole-genome sequencing
PMID: 34446064
5
ARMCX3 identified as key crosstalk-pyroptosis gene linking periodontitis and osteoporosis through MAPK signaling and neutrophil extracellular trap formation
PMID: 35990678
6
ARMCX3 expression elevated in drug-induced senescent melanoma cells
PMID: 40202610
7
Epstein-Barr virus-encoded non-coding RNAs downregulate ARMCX3 mRNA to facilitate viral replication
PMID: 40197026
8
ARMCX3 shows differential DNA methylation in muscle stem cells from low birth weight individuals associated with metabolic dysfunction
PMID: 31566019
Disease Associationsⓘ20
hepatocellular carcinomaOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.05Suggestive
obesityOpen Targets
0.03Suggestive
non-alcoholic fatty liver diseaseOpen Targets
0.02Suggestive
juvenile dermatomyositisOpen Targets
0.01Suggestive
papillary thyroid carcinomaOpen Targets
0.01Suggestive
psoriasisOpen Targets
0.01Suggestive
osteoporosis-pseudoglioma syndromeOpen Targets
0.01Suggestive
kidney oncocytomaOpen Targets
0.01Suggestive
Hepatic steatosisOpen Targets
0.01Suggestive
liver cancerOpen Targets
0.00Suggestive
melanomaOpen Targets
0.00Suggestive
periodontitisOpen Targets
0.00Suggestive
hepatitis B virus induced hepatocellular carcinomaOpen Targets
0.00Suggestive
AIDSOpen Targets
0.00Suggestive
HIV-1 infectionOpen Targets
0.00Suggestive
non-alcoholic steatohepatitisOpen Targets
0.00Suggestive
stomach neoplasmOpen Targets
0.00Suggestive
very long chain acyl-CoA dehydrogenase deficiencyOpen Targets
0.00Suggestive
cancerOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ARMCX2Shared pathway100%ARMCX1Shared pathway100%ARMC10Shared pathway100%ARMCX6Shared pathway100%TRAK2Protein interaction85%SYBUShared pathway50%
Tissue Expression6 tissues
Heart
100%
Brain
72%
Ovary
53%
Lung
40%
Liver
34%
Bone Marrow
33%
Gene Interaction Network
Click a node to explore
ARMCX3ARMCX2ARMCX1ARMC10ARMCX6TRAK2SYBU
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9UH62
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.61LoF Tolerant
pLIⓘ
0.88Intermediate
Observed/Expected LoF0.24 [0.11–0.61]
RankingsWhere ARMCX3 stands among ~20K protein-coding genes
  • #7,236of 20,598
    Most Researched64
  • #4,272of 17,882
    Most Constrained (LOEUF)0.61 · top quartile
Genes detectedARMCX3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Screening of crosstalk and pyroptosis-related genes linking periodontitis and osteoporosis based on bioinformatics and machine learning.
PMID: 35990678
Front Immunol · 2022
1.00
2
ITGA1, the alpha 1 subunit of integrin receptor, is a novel marker of drug-resistant senescent melanoma cells in vitro.
PMID: 40202610
Arch Toxicol · 2025
0.90
3
ARMCX3 regulates ROS signaling, affects neural differentiation and inflammatory microenvironment in dental pulp stem cells.
PMID: 39296219
Heliyon · 2024
0.80
4
The armadillo-repeat containing X-linked protein 3, ARMCX3, is a negative regulator of the browning of adipose tissue associated with obesity.
PMID: 35705702
Int J Obes (Lond) · 2022
0.70
5
The Eutherian Armcx genes regulate mitochondrial trafficking in neurons and interact with Miro and Trak2.
PMID: 22569362
Nat Commun · 2012
0.60