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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
C19orf12
chromosome 19 open reading frame 12
Chromosome 19 Β· 19q12
NCBI Gene: 83636Ensembl: ENSG00000131943.21HGNC: HGNC:25443UniProt: Q9NSK7
46PubMed Papers
22Diseases
0Drugs
33Pathogenic Variants
FUNCTIONAL ROLE
Apoptosis
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
lipid metabolic processautophagyapoptotic processresponse to oxidative stressneurodegeneration with brain iron accumulation 4Autosomal recessive spastic paraplegia type 43hereditary spastic paraplegia 43neurodegeneration with brain iron accumulation
✦AI Summary

C19orf12 is a mitochondrial protein whose loss-of-function mutations cause mitochondrial membrane protein-associated neurodegeneration (MPAN), a rare form of neurodegeneration with brain iron accumulation (NBIA) 12. C19orf12 is the third most common genetic cause of NBIA disorders 1. The protein localizes to mitochondria and lipid droplets, where it regulates mitochondrial fatty acid metabolism and adipocyte lipid storage capacity 3. Mechanistically, C19orf12 interacts with mitochondrial outer membrane translocase complexes and influences mitochondrial respiratory function 34. In disease contexts, C19orf12 dysfunction impairs mitochondrial respiration and calcium homeostasis, contributing to neurodegeneration with characteristic basal ganglia iron accumulation 2. C19orf12 mutations exhibit variable clinical presentations, including progressive movement disorders, spastic paraplegia, and ALS-like syndromes, reflecting complex genotype-phenotype relationships 5. Drosophila models with impaired C19orf12 orthologs recapitulate the neurodegenerative phenotype, validating the gene's pathogenic role 6. Currently, no causal therapy exists; treatment remains symptomatic, though induced pluripotent stem cell lines from MPAN patients provide platforms for mechanistic studies and therapeutic development 7.

Sources cited
1
C19orf12 mutations cause mitochondrial membrane protein-associated neurodegeneration, the third most common NBIA disorder
PMID: 29325618
2
MPAN is a rare monogenic neurodegeneration characterized by brain iron accumulation due to C19orf12 variants
PMID: 40867110
3
C19orf12 is a lipid droplet protein that interacts with mitochondrial translocase complexes and regulates adipocyte lipid storage and mitochondrial fatty acid metabolism
PMID: 38565923
4
C19orf12 inhibits mitochondrial respiration by suppressing LRPPRC function and downregulating electron transport chain gene expression
PMID: 40833854
5
C19orf12 biallelic mutations present with variable phenotypes including SPG43 and ALS-like syndromes
PMID: 33394258
6
Drosophila models with impaired C19orf12 orthologs display neurodegenerative phenotype and bang sensitivity
PMID: 24586779
7
iPSC lines from MPAN patients with C19orf12 mutations provide resources for mechanistic studies and therapeutic development
PMID: 37689041
Disease Associationsβ“˜22
neurodegeneration with brain iron accumulation 4Open Targets
0.85Strong
Autosomal recessive spastic paraplegia type 43Open Targets
0.72Strong
hereditary spastic paraplegia 43Open Targets
0.64Moderate
neurodegeneration with brain iron accumulationOpen Targets
0.61Moderate
hereditary spastic paraplegiaOpen Targets
0.46Moderate
DystoniaOpen Targets
0.34Weak
Mental deteriorationOpen Targets
0.34Weak
Adult-onset night blindnessOpen Targets
0.34Weak
dystonic disorderOpen Targets
0.34Weak
essential tremorOpen Targets
0.34Weak
Peripheral visual field lossOpen Targets
0.34Weak
spastic ataxiaOpen Targets
0.34Weak
TremorOpen Targets
0.34Weak
Abnormality of iron homeostasisOpen Targets
0.33Weak
Abnormal central motor functionOpen Targets
0.27Weak
Global developmental delayOpen Targets
0.27Weak
Intellectual disabilityOpen Targets
0.27Weak
NeurodegenerationOpen Targets
0.26Weak
Iron accumulation in brainOpen Targets
0.26Weak
neurofibromatosis type 1Open Targets
0.26Weak
Neurodegeneration with brain iron accumulation 4UniProt
Spastic paraplegia 43, autosomal recessiveUniProt
Pathogenic Variants33
NM_031448.6(C19orf12):c.171_181del (p.Gly58fs)Pathogenic
Neurodegeneration with brain iron accumulation 4|Hereditary spastic paraplegia 43|not provided|Neurodegeneration with brain iron accumulation|C19orf12-related disorder|Neurodegeneration with brain iron accumulation 4;Hereditary spastic paraplegia 43
β˜…β˜…β˜†β˜†2026β†’ Residue 58
NM_001031726.4(C19orf12):c.164_166delGGGPathogenic
Neurodegeneration with brain iron accumulation 4|not provided|Neurodegeneration with brain iron accumulation|Neurofibromatosis, type 1|Hereditary spastic paraplegia 43;Neurodegeneration with brain iron accumulation 4|Hereditary spastic paraplegia 43
β˜…β˜…β˜†β˜†2025
NM_031448.6(C19orf12):c.161G>A (p.Gly54Glu)Pathogenic
Neurodegeneration with brain iron accumulation 4|Hereditary spastic paraplegia 43|not provided|Neurodegeneration with brain iron accumulation
β˜…β˜…β˜†β˜†2025β†’ Residue 54
NM_031448.6(C19orf12):c.-2C>TPathogenic
Neurodegeneration with brain iron accumulation 4|not provided|Abnormality of iron homeostasis|Hereditary spastic paraplegia 43|Neurodegeneration with brain iron accumulation|Neurodegeneration with brain iron accumulation 4;Hereditary spastic paraplegia 43
β˜…β˜…β˜†β˜†2025
NM_031448.6(C19orf12):c.371dup (p.Met124fs)Pathogenic
Neurodegeneration with brain iron accumulation 4|Abnormal central motor function|not provided|Hereditary spastic paraplegia 43
β˜…β˜…β˜†β˜†2025β†’ Residue 124
NM_031448.6(C19orf12):c.172G>A (p.Gly58Arg)Pathogenic
Neurodegeneration with brain iron accumulation 4|Dystonic disorder;Mental deterioration;Tremor;Adult-onset night blindness;Peripheral visual field loss|Hereditary spastic paraplegia 43|not provided|Neurodegeneration with brain iron accumulation|Neurodegeneration with brain iron accumulation 4;Hereditary spastic paraplegia 43
β˜…β˜…β˜†β˜†2025β†’ Residue 58
NM_031448.6(C19orf12):c.215C>T (p.Pro72Leu)Pathogenic
Neurodegeneration with brain iron accumulation 4|Hereditary spastic paraplegia 43
β˜…β˜…β˜†β˜†2025β†’ Residue 72
NM_031448.6(C19orf12):c.166delPathogenic
Hereditary spastic paraplegia|Hereditary spastic paraplegia 43|not provided|Neurodegeneration with brain iron accumulation 4
β˜…β˜…β˜†β˜†2024
NM_031448.6(C19orf12):c.205C>T (p.Gln69Ter)Pathogenic
not provided|Neurodegeneration with brain iron accumulation 4
β˜…β˜…β˜†β˜†2020β†’ Residue 69
NM_031448.6(C19orf12):c.161G>T (p.Gly54Val)Likely pathogenic
Intellectual disability;Global developmental delay|not provided|Neurodegeneration with brain iron accumulation 4
β˜…β˜…β˜†β˜†2020β†’ Residue 54
NM_031448.6(C19orf12):c.161-2A>TLikely pathogenic
Hereditary spastic paraplegia 43
β˜…β˜†β˜†β˜†2025
NM_031448.6(C19orf12):c.246del (p.Ala83fs)Pathogenic
Neurodegeneration with brain iron accumulation 4
β˜…β˜†β˜†β˜†2025β†’ Residue 83
NM_031448.6(C19orf12):c.211A>T (p.Lys71Ter)Pathogenic
Neurodegeneration with brain iron accumulation 4
β˜…β˜†β˜†β˜†2025β†’ Residue 71
NM_031448.6(C19orf12):c.271G>T (p.Glu91Ter)Pathogenic
Neurodegeneration with brain iron accumulation 4
β˜…β˜†β˜†β˜†2025β†’ Residue 91
NM_031448.6(C19orf12):c.262C>T (p.Leu88Phe)Likely pathogenic
Neurodegeneration with brain iron accumulation 4
β˜…β˜†β˜†β˜†2025β†’ Residue 88
NM_031448.6(C19orf12):c.245del (p.Pro82fs)Pathogenic
Neurodegeneration with brain iron accumulation 4
β˜…β˜†β˜†β˜†2025β†’ Residue 82
NM_031448.6(C19orf12):c.-10-1G>ALikely pathogenic
Neurodegeneration with brain iron accumulation 4
β˜…β˜†β˜†β˜†2024
NM_031448.6(C19orf12):c.139G>A (p.Gly47Ser)Pathogenic
Neurodegeneration with brain iron accumulation 4
β˜…β˜†β˜†β˜†2024β†’ Residue 47
NM_031448.6(C19orf12):c.224_234del (p.Gln75fs)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 75
NM_031448.6(C19orf12):c.267del (p.Phe89fs)Pathogenic
Neurodegeneration with brain iron accumulation|C19orf12-related disorder
β˜…β˜†β˜†β˜†2023β†’ Residue 89
View on ClinVar β†—
Related Genes
FA2HProtein interaction85%DCAF17Protein interaction85%COASYProtein interaction85%PLA2G6Protein interaction82%WDR45Protein interaction82%ATP13A2Protein interaction78%
Tissue Expression6 tissues
Liver
100%
Heart
60%
Brain
49%
Ovary
30%
Lung
25%
Bone Marrow
8%
Gene Interaction Network
Click a node to explore
C19orf12FA2HDCAF17COASYPLA2G6WDR45ATP13A2
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q9NSK7
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.57Moderately Constrained
pLIβ“˜
0.91Intolerant
Observed/Expected LoF0.18 [0.07–0.57]
RankingsWhere C19orf12 stands among ~20K protein-coding genes
  • #9,309of 20,598
    Most Researched46
  • #1,735of 5,498
    Most Pathogenic Variants33
  • #3,730of 17,882
    Most Constrained (LOEUF)0.57 Β· top quartile
Genes detectedC19orf12
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Neurodegeneration with brain iron accumulation.
PMID: 29325618
Handb Clin Neurol Β· 2018
1.00
2
A spatiotemporal proteomic map of human adipogenesis.
PMID: 38565923
Nat Metab Β· 2024
0.90
3
An Update and Perspectives on Mitochondrial Membrane Protein-Associated Neurodegeneration and
PMID: 40867110
Brain Sci Β· 2025
0.80
4
C19orf12 inhibits mitochondrial function and enhances the antitumor effects of metformin in non-small cell lung cancer.
PMID: 40833854
Cell Rep Β· 2025
0.70
5
Pantothenate kinase-associated neurodegeneration.
PMID: 22515741
Curr Drug Targets Β· 2012
0.60