HomeAboutRankingsData Sources
Β© 2026 GeneE
🧬
GeneE
1 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
C1GALT1C1L
C1GALT1 specific chaperone 1 like
Chromosome 2 Β· 2p21
NCBI Gene: 728819Ensembl: ENSG00000223658.8HGNC: HGNC:51617UniProt: P0DN25
4PubMed Papers
11Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
βœ“ Swiss-Prot Reviewed
protein O-linked glycosylationmembranepremature birthAbnormality of the immune systemself-injurious ideationDown syndrome
✦AI Summary

Based on limited published evidence, C1GALT1C1L is a glycosylation-related gene implicated in glioma biology. It encodes a C1GALT1-specific chaperone-like protein involved in protein glycosylation processes. Functional studies demonstrate that silencing C1GALT1C1L inhibits glioma cell growth and viability in U87 and U251 cell lines 1. The gene was identified as one of seven glycosylation-related prognostic markers associated with glioma patient outcomes, correlating with immune cell infiltration patterns and glycan synthesis pathways 1. However, specific molecular mechanisms and expression patterns in other tissues remain unclear.

Sources cited
1
C1GALT1C1L is a glycosylation-related gene associated with glioma prognosis; silencing it inhibits glioma cell viability and growth; it correlates with immune infiltration and serves as a prognostic biomarker
PMID: 38396140
⚠Limited data available β€” This gene has 1 indexed publication. Summary and analysis may be incomplete.
Disease Associationsβ“˜11
premature birthOpen Targets
0.08Suggestive
Abnormality of the immune systemOpen Targets
0.06Suggestive
self-injurious ideationOpen Targets
0.05Suggestive
Down syndromeOpen Targets
0.02Suggestive
hypertensionOpen Targets
0.02Suggestive
nephrolithiasisOpen Targets
0.02Suggestive
urolithiasisOpen Targets
0.02Suggestive
ovarian neoplasmOpen Targets
0.02Suggestive
gliomaOpen Targets
0.01Suggestive
metopic craniosynostosisOpen Targets
0.00Suggestive
osteosarcomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
EOGTShared pathway100%C1GALT1C1Protein interaction95%GCNT1Protein interaction92%ST3GAL1Protein interaction92%ST3GAL2Protein interaction92%GALNT4Protein interaction92%
Tissue Expression6 tissues
Heart
100%
Ovary
55%
Brain
21%
Liver
6%
Lung
6%
Bone Marrow
2%
Gene Interaction Network
Click a node to explore
C1GALT1C1LEOGTC1GALT1C1GCNT1ST3GAL1ST3GAL2GALNT4
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt P0DN25
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.85LoF Tolerant
pLIβ“˜
0.10Tolerant
Observed/Expected LoF0.88 [0.33–1.85]
RankingsWhere C1GALT1C1L stands among ~20K protein-coding genes
  • #18,533of 20,598
    Most Researched4
  • #16,844of 17,882
    Most Constrained (LOEUF)1.85
Genes detectedC1GALT1C1L
Sources retrieved1 papers
Response timeβ€”
πŸ“„ Sources
1
1
Predictive potentials of glycosylation-related genes in glioma prognosis and their correlation with immune infiltration.
PMID: 38396140
Sci Rep Β· 2024
1.00