HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
CENPT
centromere protein T
Chromosome 16 · 16q22.1
NCBI Gene: 80152Ensembl: ENSG00000102901.14HGNC: HGNC:25787UniProt: B3KPB2
54PubMed Papers
21Diseases
0Drugs
1Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
CLINICAL
OMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nucleoplasmnuclear bodyprotein bindingmitotic cell cycleneurodegenerative diseaseshort stature and microcephaly with genital anomaliesmethylmalonic aciduria and homocystinuria, cb1L typemethylmalonic acidemia with homocystinuria, type cblX
✦AI Summary

CENPT (centromere protein T) is a constitutive inner kinetochore protein essential for chromosome 16 and cell division. As a component of the CENP-T-W-S-X heterotetrameric complex, CENPT binds and supercoils DNA while bridging adjacent CENPA nucleosomes at centromeres 1. CENPT functions within the constitutive centromere-associated network (CCAN) to recruit outer kinetochore components and the KMN network, enabling microtubule attachment and spindle function 2. Higher-order CENPT oligomerization at centromeres triggers robust outer kinetochore formation through density-dependent recruitment mechanisms 3. CENPT is required for normal mitotic progression and chromosome 16 4. Disease relevance includes severe primordial growth failure caused by CENPT mutations, resulting in aberrant cell division, micronuclei accumulation, and chr16 segregation defects 5. Additionally, CENPT is highly expressed in renal cell carcinoma where it promotes tumor proliferation by interacting with glutathione synthesis machinery to inhibit ferroptosis 6. Clinically, CENPT mutations associate with short stature, microcephaly, and genital anomalies, highlighting its critical role in developmental processes dependent on accurate cell division and chromosome 16.

Sources cited
1
CENPT bridges adjacent CENPA nucleosomes and interacts with CENPB/CENPC complex at centromeres
PMID: 27384170
2
CENPT is part of CCAN and required in parallel with CENP-C for kinetochore specification and spindle attachment
PMID: 21751032
3
Higher-order CENPT oligomerization triggers robust outer kinetochore formation through density-dependent recruitment
PMID: 38168769
4
Banp directly regulates cenpt transcription for chromosome segregation during mitosis
PMID: 35942692
5
CENPT mutations cause severe primordial growth failure with aberrant cell division and chromosomal segregation defects
PMID: 29228025
6
CENPT is highly expressed in renal cell carcinoma and promotes tumor progression by regulating glutathione metabolism to inhibit ferroptosis
PMID: 40651948
Disease Associationsⓘ21
neurodegenerative diseaseOpen Targets
0.53Moderate
short stature and microcephaly with genital anomaliesOpen Targets
0.38Weak
methylmalonic aciduria and homocystinuria, cb1L typeOpen Targets
0.33Weak
methylmalonic acidemia with homocystinuria, type cblXOpen Targets
0.27Weak
spinocerebellar ataxia 51Open Targets
0.12Weak
renal cell carcinomaOpen Targets
0.08Suggestive
Fuchs endothelial corneal dystrophyOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.06Suggestive
Abnormality of the skeletal systemOpen Targets
0.06Suggestive
congenital hereditary endothelial dystrophy of corneaOpen Targets
0.06Suggestive
corneal endothelial dystrophyOpen Targets
0.05Suggestive
keratoconus 1Open Targets
0.05Suggestive
posterior polymorphous corneal dystrophyOpen Targets
0.04Suggestive
X-linked endothelial corneal dystrophyOpen Targets
0.04Suggestive
keratoconus 5Open Targets
0.04Suggestive
keratoconus 9Open Targets
0.04Suggestive
Central cloudy dystrophy of FrancoisOpen Targets
0.04Suggestive
central cloudy dystrophy of FrançoisOpen Targets
0.04Suggestive
Schnyder corneal dystrophyOpen Targets
0.04Suggestive
corneal dystrophy, Fuchs endothelial, 6Open Targets
0.04Suggestive
Short stature and microcephaly with genital anomaliesUniProt
Pathogenic Variants1
NM_025082.4(CENPT):c.1186+1G>APathogenic
Short stature and microcephaly with genital anomalies
☆☆☆☆2022
View on ClinVar ↗
Related Genes
CENPAProtein interaction100%CENPIProtein interaction100%TRAProtein interaction100%ITGB3BPProtein interaction100%MIS18AProtein interaction100%CENPQProtein interaction100%
Tissue Expression6 tissues
Ovary
100%
Bone Marrow
99%
Liver
75%
Lung
68%
Heart
35%
Brain
14%
Gene Interaction Network
Click a node to explore
CENPTCENPACENPITRAITGB3BPMIS18ACENPQ
PROTEIN STRUCTURE
Preparing viewer…
PDB7R5S · 2.83 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.92LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.71 [0.55–0.92]
RankingsWhere CENPT stands among ~20K protein-coding genes
  • #8,292of 20,598
    Most Researched54
  • #5,075of 5,498
    Most Pathogenic Variants1
  • #8,396of 17,882
    Most Constrained (LOEUF)0.92
Genes detectedCENPT
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
CENPT prevents renal cell carcinoma against ferroptosis by enhancing the synthesis of glutathione.
PMID: 40651948
Cell Death Dis · 2025
1.00
2
CENPT bridges adjacent CENPA nucleosomes on young human α-satellite dimers.
PMID: 27384170
Genome Res · 2016
0.90
3
The ABCs of CENPs.
PMID: 21751032
Chromosoma · 2011
0.80
4
Independence of centromeric and pericentromeric chromatin stability on CCAN components.
PMID: 39937678
Mol Biol Cell · 2025
0.70
5
Global gene expression analysis reveals a subtle effect of DEHP in human granulosa cell line HGrC1.
PMID: 37536456
Reprod Toxicol · 2023
0.60