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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CHMP3
charged multivesicular body protein 3
Chromosome 2 · 2p11.2
NCBI Gene: 51652Ensembl: ENSG00000115561.17HGNC: HGNC:29865UniProt: Q9Y3E7
86PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
regulation of centrosome duplicationmitotic metaphase chromosome alignmentregulation of mitotic spindle assemblyregulation of exosomal secretionneurodegenerative diseaseAbnormality of the skeletal systemHIV infectionviral disease
✦AI Summary

CHMP3 is a core component of the ESCRT-III complex, a highly conserved membrane remodeling machinery essential for multiple cellular processes. CHMP3 assembles into helical polymers with other ESCRT-III proteins, particularly CHMP2A, to form tubular structures that constrict and cleave negatively curved membranes 1. This polymer formation is achieved through conformational changes that stabilize individual protomers 2. Mechanistically, CHMP3 selectively binds phosphoinositides (PtdIns(3,5)P2 and PtdIns(3,4)P2) and coordinates with the AAA-ATPase VPS4 to mediate membrane fission events 1. CHMP3 functions in multivesicular body biogenesis and cargo sorting into lysosomes, cytokinesis abscission, and enveloped virus budding, including HIV-1 2. Its activity in endosomal sorting is regulated by CK2α-mediated phosphorylation 3. Disease relevance includes spastic paraplegia: a homozygous CHMP3 missense variant (p.Thr173Ile) causes reduced CHMP3 expression, leading to aberrant autophagy with endosomal and autophagosomal accumulation 4. CHMP3 is also implicated as a biomarker in diabetic foot ulcers, where downregulation correlates with disease progression 5. The functional importance of CHMP3 is underscored by engineered retroCHMP3 variants that potently inhibit viral budding while preserving essential cellular ESCRT functions 6.

Sources cited
1
CHMP2A-CHMP3 form helical filaments that constrict and cleave membranes with VPS4
PMID: 36604498
2
CHMP3 forms variable helical polymers and acts synergistically with CHMP2A during HIV-1 budding
PMID: 23051622
3
CK2α phosphorylates CHMP3 and regulates its function in MVB sorting
PMID: 24440309
4
Homozygous CHMP3 variant (p.Thr173Ile) causes complex spastic paraplegia through aberrant autophagy
PMID: 35710109
5
RNF103-CHMP3 is identified as a key gene associated with diabetic foot ulcers and tissue repair
PMID: 39543487
6
retroCHMP3 proteins inhibit enveloped virus budding while preserving cellular ESCRT functions
PMID: 34597582
7
ESCRT-III including CHMP3 is required for multivesicular body formation, cytokinesis, and virus budding
PMID: 19143622
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.51Moderate
Abnormality of the skeletal systemOpen Targets
0.48Moderate
HIV infectionOpen Targets
0.46Moderate
viral diseaseOpen Targets
0.46Moderate
obesityOpen Targets
0.41Moderate
COVID-19Open Targets
0.37Weak
severe acute respiratory syndromeOpen Targets
0.37Weak
major depressive disorderOpen Targets
0.33Weak
ocular hypotensionOpen Targets
0.31Weak
overnutritionOpen Targets
0.31Weak
atrial fibrillationOpen Targets
0.25Weak
myeloid leukemiaOpen Targets
0.24Weak
liver cancerOpen Targets
0.07Suggestive
Fuchs endothelial corneal dystrophyOpen Targets
0.06Suggestive
hepatocellular carcinomaOpen Targets
0.06Suggestive
Familial ocular anterior segment mesenchymal dysgenesisOpen Targets
0.05Suggestive
granular corneal dystrophy type IOpen Targets
0.05Suggestive
congenital hereditary endothelial dystrophy of corneaOpen Targets
0.05Suggestive
Cataract-microcornea syndromeOpen Targets
0.05Suggestive
Juvenile cataract - microcornea - renal glucosuriaOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TSG101Protein interaction100%STAMProtein interaction100%HGSProtein interaction100%VPS4BProtein interaction100%IST1Protein interaction100%STAM2Protein interaction100%
Tissue Expression6 tissues
Heart
100%
Brain
81%
Lung
52%
Ovary
34%
Bone Marrow
27%
Liver
12%
Gene Interaction Network
Click a node to explore
CHMP3TSG101STAMHGSVPS4BIST1STAM2
PROTEIN STRUCTURE
Preparing viewer…
PDB2XZE · 1.75 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.54Moderately Constrained
pLIⓘ
0.94Intolerant
Observed/Expected LoF0.30 [0.18–0.54]
RankingsWhere CHMP3 stands among ~20K protein-coding genes
  • #5,535of 20,598
    Most Researched86
  • #3,448of 17,882
    Most Constrained (LOEUF)0.54 · top quartile
Genes detectedCHMP3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Machine learning-driven discovery of novel therapeutic targets in diabetic foot ulcers.
PMID: 39543487
Mol Med · 2024
1.00
2
RetroCHMP3 blocks budding of enveloped viruses without blocking cytokinesis.
PMID: 34597582
Cell · 2021
0.90
3
The plasma peptides of Alzheimer's disease.
PMID: 34182925
Clin Proteomics · 2021
0.80
4
Structural basis of CHMP2A-CHMP3 ESCRT-III polymer assembly and membrane cleavage.
PMID: 36604498
Nat Struct Mol Biol · 2023
0.70
5
ESCRT-III CHMP2A and CHMP3 form variable helical polymers in vitro and act synergistically during HIV-1 budding.
PMID: 23051622
Cell Microbiol · 2013
0.60