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GeneE
4 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
CSNK1A1L
casein kinase 1 alpha 1 like
Chromosome 13 Β· 13q13.3
NCBI Gene: 122011Ensembl: ENSG00000180138.7HGNC: HGNC:20289UniProt: Q8N752
34PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Kinase
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
negative regulation of canonical Wnt signaling pathwaynucleuscytoplasmprotein serine/threonine kinase activitydiabetes mellitusalcohol drinkingneuroinflammatory disordertemporomandibular joint disorder
✦AI Summary

CSNK1A1L (casein kinase 1 alpha 1 like) is a serine/threonine protein kinase that functions as a negative regulator of canonical Wnt signaling pathway 1. The protein localizes to both cytoplasm and nucleus and phosphorylates multiple protein substrates, particularly acidic proteins 1. CSNK1A1L participates in Wnt signal transduction, a pathway critical for bone homeostasis and skeletal development 2. The gene exhibits altered DNA methylation patterns in hip fracture patients compared to osteoarthritis patients, suggesting epigenetic regulation of Wnt pathway activity in bone metabolism 2. CSNK1A1L expression is regulated by microRNAs involved in osteoporotic fracture pathogenesis; miR-576-3p specifically targets CSNK1A1L to decrease its levels in osteoblasts, affecting bone formation 3. A genome-wide association study identified a novel locus near CSNK1A1L associated with coronary artery calcification in individuals with type 2 diabetes, suggesting potential cardiovascular relevance 4. Additionally, CSNK1A1L expression is dysregulated in arsenic-induced keratinocyte proliferation, implicating it in carcinogenic pathways 1. These findings indicate CSNK1A1L regulates both skeletal and cardiovascular disease susceptibility through Wnt signaling modulation.

Sources cited
1
CSNK1A1L locus associated with coronary artery calcification in type 2 diabetes patients
PMID: 34241534
2
miR-576-3p targets CSNK1A1L to regulate osteoblast function and osteoporotic fracture prediction
PMID: 32765697
3
CSNK1A1L shows differential methylation in hip fracture versus osteoarthritis and participates in Wnt pathway regulation in bone
PMID: 24096177
4
CSNK1A1L is a Wnt signaling component dysregulated in arsenic-induced keratinocyte proliferation
PMID: 31232011
⚠Limited data available β€” This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
diabetes mellitusOpen Targets
0.21Weak
alcohol drinkingOpen Targets
0.20Weak
neuroinflammatory disorderOpen Targets
0.19Weak
temporomandibular joint disorderOpen Targets
0.19Weak
neurodegenerative diseaseOpen Targets
0.18Weak
melanomaOpen Targets
0.08Suggestive
gliomaOpen Targets
0.07Suggestive
nail-patella syndromeOpen Targets
0.07Suggestive
hepatocellular carcinomaOpen Targets
0.04Suggestive
neoplasmOpen Targets
0.04Suggestive
Varicose veinsOpen Targets
0.03Suggestive
cancerOpen Targets
0.03Suggestive
laryngeal squamous cell carcinomaOpen Targets
0.03Suggestive
Alzheimer diseaseOpen Targets
0.03Suggestive
lymphatic system diseaseOpen Targets
0.02Suggestive
vein disorderOpen Targets
0.02Suggestive
lumbar disc herniationOpen Targets
0.02Suggestive
Palmar FibromatosisOpen Targets
0.02Suggestive
infectionOpen Targets
0.02Suggestive
colorectal carcinomaOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
TLE4Shared pathway100%TMEM131LShared pathway100%TLE7Shared pathway100%TPBGLShared pathway100%TMEM170BShared pathway100%TMEM278Shared pathway100%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
14%
Brain
7%
Ovary
4%
Heart
0%
Liver
0%
Gene Interaction Network
Click a node to explore
CSNK1A1LTLE4TMEM131LTLE7TPBGLTMEM170BTMEM278
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q8N752
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.12LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.77 [0.54–1.12]
RankingsWhere CSNK1A1L stands among ~20K protein-coding genes
  • #11,134of 20,598
    Most Researched34
  • #11,490of 17,882
    Most Constrained (LOEUF)1.12
Genes detectedCSNK1A1L
Sources retrieved4 papers
Response timeβ€”
πŸ“„ Sources
4
1
Multiethnic Genome-Wide Association Study of Subclinical Atherosclerosis in Individuals With Type 2 Diabetes.
PMID: 34241534
Circ Genom Precis Med Β· 2021
1.00
2
A validated miRNA signature for the diagnosis of osteoporosis related fractures using SVM algorithm classification.
PMID: 32765697
Exp Ther Med Β· 2020
0.75
3
Contribution of genetic and epigenetic mechanisms to Wnt pathway activity in prevalent skeletal disorders.
PMID: 24096177
Gene Β· 2013
0.50
4
Arotinoid trometamol inhibits arsenic trioxide-stimulated keratinocyte proliferation via the Wnt, Shh, and bone morphogenetic protein signaling pathways.
PMID: 31232011
J Biol Regul Homeost Agents Β· 2019
0.25