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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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EARS2
glutamyl-tRNA synthetase 2, mitochondrial
Chromosome 16 Β· 16p12.2
NCBI Gene: 124454Ensembl: ENSG00000103356.18HGNC: HGNC:29419UniProt: Q5JPH6
58PubMed Papers
21Diseases
0Drugs
35Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
glutamyl-tRNA aminoacylationglutamate-tRNA(Gln) ligase activitytRNA aminoacylation for mitochondrial protein translationmitochondrionLeukoencephalopathy - thalamus and brainstem anomalies - high lactateleukoencephalopathy-thalamus and brainstem anomalies-high lactate syndromegenetic disordermitochondrial disease
✦AI Summary

EARS2 encodes mitochondrial glutamyl-tRNA synthetase, a non-discriminating enzyme that catalyzes aminoacylation of both mitochondrial tRNA(Glu) and tRNA(Gln) through a two-step reaction involving ATP-dependent glutamate activation and transfer to the tRNA acceptor end 1. This enzyme is essential for mitochondrial protein translation, specifically for synthesizing the 13 electron transport chain subunits encoded by mitochondrial DNA 2. Pathogenic biallelic EARS2 mutations cause Combined Oxidative Phosphorylation Deficiency 12 (COXPD12), presenting as leukoencephalopathy with thalamus and brainstem involvement and high lactate (LTBL) 3. Patients typically present within the first year of life with hypotonia, spasticity, neurodevelopmental delay, and elevated lactate 4. Disease phenotypes cluster into severe (neonatal lethality, progressive deterioration) and mild (variable improvement with striking MRI resolution) presentations, though no genotype-phenotype correlation has been definitively established 4. EARS2 deficiency impairs mitochondrial metabolism, disrupting TCA cycle and amino acid metabolism 2, with some cases demonstrating immune dysfunction including B-cell abnormalities and recurrent infections 5. Remarkably, LTBL is among the few reversible mitochondrial disorders, with documented cases showing clinical and radiological improvement 3. Recent Mendelian randomization studies identify EARS2 as a potential causal gene for Alzheimer's disease 6.

Sources cited
1
EARS2 catalyzes aminoacylation of mitochondrial tRNA(Glu) and tRNA(Gln) through ATP-dependent two-step reaction
PMID: 19805282
2
EARS2 is required for translation of 13 electron transport chain subunits encoded by mitochondrial DNA; pathogenic variants cause combined oxidative phosphorylation deficiency with metabolic abnormalities
PMID: 33855712
3
EARS2 mutations cause leukoencephalopathy with thalamus and brainstem involvement and high lactate (LTBL); disease presents in infancy with two phenotypic groups (mild with partial recovery, severe with stagnation)
PMID: 22492562
4
EARS2 deficiency presents within first year with hypotonia/spasticity and neurodevelopmental delay; shows phenotypic spectrum with variable disease progression; no pathognomonic features or genotype-phenotype correlation identified
PMID: 39173847
5
EARS2 mutations impair mitochondrial metabolism, decrease CD38 expression, increase reactive oxygen species, and cause B-cell dysfunction leading to immunological complications
PMID: 40389993
6
EARS2 identified as potential causal gene for Alzheimer's disease through Mendelian randomization analysis
PMID: 39347895
Disease Associationsβ“˜21
Leukoencephalopathy - thalamus and brainstem anomalies - high lactateOpen Targets
0.83Strong
leukoencephalopathy-thalamus and brainstem anomalies-high lactate syndromeOpen Targets
0.75Strong
genetic disorderOpen Targets
0.47Moderate
mitochondrial diseaseOpen Targets
0.41Moderate
epilepsyOpen Targets
0.37Weak
Leigh syndromeOpen Targets
0.37Weak
Abnormal facial shapeOpen Targets
0.34Weak
Abnormal pinna morphologyOpen Targets
0.34Weak
Bilateral tonic-clonic seizureOpen Targets
0.34Weak
Global developmental delayOpen Targets
0.34Weak
High palateOpen Targets
0.34Weak
Limb tremorOpen Targets
0.34Weak
Motor delayOpen Targets
0.34Weak
Prominent foreheadOpen Targets
0.34Weak
SeizureOpen Targets
0.34Weak
arthrogryposis multiplex congenitaOpen Targets
0.33Weak
fetal akinesia deformation sequenceOpen Targets
0.33Weak
fetal akinesia deformation sequence 1Open Targets
0.33Weak
combined oxidative phosphorylation deficiencyOpen Targets
0.17Weak
hepatocellular carcinomaOpen Targets
0.15Weak
Combined oxidative phosphorylation deficiency 12UniProt
Pathogenic Variants35
NM_001083614.2(EARS2):c.212del (p.Phe71fs)Pathogenic
not provided|Leukoencephalopathy-thalamus and brainstem anomalies-high lactate syndrome
β˜…β˜…β˜†β˜†2026β†’ Residue 71
NM_001083614.2(EARS2):c.320G>A (p.Arg107His)Pathogenic
not provided|Leukoencephalopathy-thalamus and brainstem anomalies-high lactate syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 107
NM_001083614.2(EARS2):c.328G>A (p.Gly110Ser)Pathogenic
Leukoencephalopathy-thalamus and brainstem anomalies-high lactate syndrome|not provided|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025β†’ Residue 110
NM_001083614.2(EARS2):c.322C>T (p.Arg108Trp)Pathogenic
Leukoencephalopathy-thalamus and brainstem anomalies-high lactate syndrome|not provided|Inborn genetic diseases|9 conditions|See cases
β˜…β˜…β˜†β˜†2025β†’ Residue 108
NM_001083614.2(EARS2):c.428C>G (p.Ser143Ter)Pathogenic
Leukoencephalopathy-thalamus and brainstem anomalies-high lactate syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 143
NM_001083614.2(EARS2):c.417_418del (p.Cys140fs)Pathogenic
not provided|Leukoencephalopathy-thalamus and brainstem anomalies-high lactate syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 140
NM_001083614.2(EARS2):c.500G>A (p.Cys167Tyr)Pathogenic
Leukoencephalopathy-thalamus and brainstem anomalies-high lactate syndrome|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 167
NM_001083614.2(EARS2):c.1A>G (p.Met1Val)Pathogenic
Leukoencephalopathy-thalamus and brainstem anomalies-high lactate syndrome
β˜…β˜…β˜†β˜†2024β†’ Residue 1
NM_001083614.2(EARS2):c.1413del (p.Lys471fs)Pathogenic
not provided
β˜…β˜…β˜†β˜†2023β†’ Residue 471
NM_001083614.2(EARS2):c.744dup (p.Glu249Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2026β†’ Residue 249
NM_001083614.2(EARS2):c.920T>C (p.Leu307Ser)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 307
NM_001083614.2(EARS2):c.499T>C (p.Cys167Arg)Likely pathogenic
Leukoencephalopathy-thalamus and brainstem anomalies-high lactate syndrome
β˜…β˜†β˜†β˜†2025β†’ Residue 167
NM_001083614.2(EARS2):c.1159C>T (p.Gln387Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 387
NM_001083614.2(EARS2):c.197del (p.Lys66fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 66
NM_001083614.2(EARS2):c.958+1G>ALikely pathogenic
not provided
β˜…β˜†β˜†β˜†2024
NM_001083614.2(EARS2):c.295+2T>CLikely pathogenic
not provided|Nonpapillary renal cell carcinoma
β˜…β˜†β˜†β˜†2024
NM_001083614.2(EARS2):c.949G>T (p.Gly317Cys)Pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 317
NM_001083614.2(EARS2):c.202C>T (p.Gln68Ter)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 68
NM_001083614.2(EARS2):c.1240C>T (p.Gln414Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2022β†’ Residue 414
NM_001083614.2(EARS2):c.286G>A (p.Glu96Lys)Pathogenic
Leukoencephalopathy-thalamus and brainstem anomalies-high lactate syndrome
β˜…β˜†β˜†β˜†2022β†’ Residue 96
View on ClinVar β†—
Related Genes
RPL36Protein interaction100%RPS24Protein interaction100%RPS21Protein interaction100%RPL34Protein interaction100%RPL23Protein interaction100%RPL30Protein interaction100%
Tissue Expression6 tissues
Heart
100%
Liver
98%
Brain
68%
Ovary
43%
Lung
37%
Bone Marrow
20%
Gene Interaction Network
Click a node to explore
EARS2RPL36RPS24RPS21RPL34RPL23RPL30
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q5JPH6
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.14LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.88 [0.69–1.14]
RankingsWhere EARS2 stands among ~20K protein-coding genes
  • #7,862of 20,598
    Most Researched58
  • #1,680of 5,498
    Most Pathogenic Variants35
  • #11,796of 17,882
    Most Constrained (LOEUF)1.14
Genes detectedEARS2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
New perspective in diagnostics of mitochondrial disorders: two years' experience with whole-exome sequencing at a national paediatric centre.
PMID: 27290639
J Transl Med Β· 2016
1.00
2
Phenotyping mitochondrial glutamyl-tRNA synthetase deficiency (EARS2): A case series and systematic literature review.
PMID: 39173847
Neurobiol Dis Β· 2024
0.90
3
B cell dysfunction in thalamus and brainstem involvement and high lactate caused by novel mutation of EARS2 gene.
PMID: 40389993
Ital J Pediatr Β· 2025
0.80
4
EARS2 significantly coexpresses with PALB2 in breast and pancreatic cancer.
PMID: 35779338
Cancer Treat Res Commun Β· 2022
0.70
5
Leukoencephalopathy with thalamus and brainstem involvement and high lactate 'LTBL' caused by EARS2 mutations.
PMID: 22492562
Brain Β· 2012
0.60