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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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HOXC10
homeobox C10
Chromosome 12 · 12q13.13
NCBI Gene: 3226Ensembl: ENSG00000180818.5HGNC: HGNC:5122UniProt: Q53XI4
61PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA polymerase II transcription regulatory region sequence-specific DNA bindingnegative regulation of cold-induced thermogenesispositive regulation of transcription by RNA polymerase IIDNA-binding transcription activator activity, RNA polymerase II-specificneurodegenerative diseasehemorrhoidcancerbreast cancer
✦AI Summary

HOXC10 is a homeobox transcription factor that functions as a sequence-specific DNA-binding activator of RNA polymerase II-dependent gene expression 1. Originally characterized for roles in developmental processes including limb morphogenesis and motor neuron differentiation, HOXC10 is now recognized as a critical oncogenic regulator dysregulated across multiple cancer types 1. Mechanistically, HOXC10 promotes cancer progression through multiple pathways. In glioma, HOXC10 directly binds promoter regions of immunosuppressive genes including PD-L2 and TDO2, driving their expression 2. It also activates oncogenic signaling cascades; in KRAS-mutant lung cancer, HOXC10 activates the NOD1/ERK axis to reprogram epithelial-mesenchymal transition and promote bone metastasis 3. Additionally, HOXC10 transcriptionally upregulates VEGFA through interaction with histone methyltransferases PRMT5 and WDR5, promoting tumor angiogenesis 4. In glioma microenvironments, HOXC10 enhances CCL2 expression to recruit and polarize immunosuppressive M2-type macrophages 5. Clinically, HOXC10 upregulation correlates with poor prognosis across glioma, thyroid cancer, and lung adenocarcinoma, with elevated expression associated with reduced overall survival in multiple independent datasets 26. HOXC10 knockdown inhibits cell proliferation, migration, and invasion while promoting apoptosis 25, supporting HOXC10 as a potential therapeutic target, particularly in combination with pathway inhibitors or immunotherapy strategies.

Sources cited
1
HOXC10 is a transcription factor in developmental processes and cancer that activates oncogenic pathways and drug resistance mechanisms
PMID: 34113572
2
HOXC10 is upregulated in glioma, directly binds PD-L2 and TDO2 promoters, and upregulation associates with short overall survival across three independent datasets
PMID: 29676849
3
HOXC10 drives KRAS-mutant lung cancer bone metastasis through NOD1/ERK signaling pathway activation
PMID: 39191757
4
HOXC10 knockdown reduces glioma cell proliferation, migration, invasion, and promotes apoptosis; HOXC10 enhances CCL2 expression to recruit M2 macrophages in tumor microenvironment
PMID: 35316872
5
HOXC10 expression is increased in thyroid cancer and correlates with advanced stage and poor prognosis; knockdown inhibits cell cycle progression and migration/invasion
PMID: 26279264
6
HOXC10 is upregulated in lung adenocarcinoma, correlates with metastasis and poor survival, and enhances PI3K phosphorylation and EMT marker expression
PMID: 28824453
7
HOXC10 transcriptionally upregulates VEGFA through PRMT5 and WDR5 interaction to promote glioma angiogenesis, with bevacizumab effectively inhibiting HOXC10-overexpressing tumors
PMID: 30429891
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.28Weak
hemorrhoidOpen Targets
0.15Weak
cancerOpen Targets
0.10Suggestive
breast cancerOpen Targets
0.10Suggestive
lung adenocarcinomaOpen Targets
0.10Suggestive
lung cancerOpen Targets
0.09Suggestive
hepatocellular carcinomaOpen Targets
0.09Suggestive
esophageal squamous cell carcinomaOpen Targets
0.09Suggestive
gliomaOpen Targets
0.09Suggestive
gastric cancerOpen Targets
0.09Suggestive
non-small cell lung carcinomaOpen Targets
0.09Suggestive
colorectal carcinomaOpen Targets
0.08Suggestive
osteosarcomaOpen Targets
0.08Suggestive
head and neck squamous cell carcinomaOpen Targets
0.08Suggestive
oral squamous cell carcinomaOpen Targets
0.08Suggestive
melanomaOpen Targets
0.08Suggestive
liver cancerOpen Targets
0.08Suggestive
metabolic syndromeOpen Targets
0.07Suggestive
spondyloepiphyseal dysplasia tarda, Kohn typeOpen Targets
0.07Suggestive
atrial flutterOpen Targets
0.07Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TBX4Protein interaction91%HOXC11Protein interaction87%TBX5Protein interaction79%HOXC6Protein interaction75%HOXC9Protein interaction75%HOXC13Protein interaction71%
Tissue Expression6 tissues
Ovary
100%
Lung
17%
Liver
8%
Brain
2%
Heart
0%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
HOXC10TBX4HOXC11TBX5HOXC6HOXC9HOXC13
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q53XI4
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.87LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.57 [0.38–0.87]
RankingsWhere HOXC10 stands among ~20K protein-coding genes
  • #7,564of 20,598
    Most Researched61
  • #7,697of 17,882
    Most Constrained (LOEUF)0.87
Genes detectedHOXC10
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Role of HOXC10 in Cancer.
PMID: 34113572
Front Oncol · 2021
1.00
2
HOXC10 promotes proliferation and invasion and induces immunosuppressive gene expression in glioma.
PMID: 29676849
FEBS J · 2018
0.90
3
The HOXC10/NOD1/ERK axis drives osteolytic bone metastasis of pan-KRAS-mutant lung cancer.
PMID: 39191757
Bone Res · 2024
0.80
4
[The effect of HOXC10 gene on biological behaviors of glioma cells and mechanism in tumor microenvironment].
PMID: 35316872
Zhonghua Zhong Liu Za Zhi · 2022
0.70
5
HOXC10 up-regulation contributes to human thyroid cancer and indicates poor survival outcome.
PMID: 26279264
Mol Biosyst · 2015
0.60