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50 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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IGFBP3
insulin like growth factor binding protein 3
Chromosome 7 · 7p12.3
NCBI Gene: 3486Ensembl: ENSG00000146674.17HGNC: HGNC:5472UniProt: B3KPF0
757PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
RESEARCH IMPACT
Highly StudiedTrending
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
negative regulation of protein phosphorylationprotein phosphorylationnegative regulation of cell population proliferationprotein bindingAbnormality of the skeletal systemlymphatic system diseaseAlzheimer diseasecancer
✦AI Summary

IGFBP3 is a multifunctional tumor suppressor that regulates insulin-like growth factor (IGF) signaling and exhibits independent antiproliferative effects. Primary function: IGFBP3 sequesters IGF1 and IGF2, limiting their receptor availability and suppressing IGF-mediated proliferation and promoting apoptosis 1. Beyond IGF regulation, IGFBP3 mediates cell growth inhibition through its receptor TMEM219/IGFBP-3R and the LRP-1 receptor via IRS1/IRS2 dephosphorylation 23. Nuclear IGFBP3 interacts with transcription factors like RXRA to regulate apoptotic signaling 1. Mechanism: IGFBP3 additionally regulates mitophagy through mTOR signaling under hyperosmolar stress 4 and mediates mitochondrial quality control in epithelial tissues. Recent evidence suggests IGFBP3 stabilizes PPAR-γ through deubiquitination, suppressing hepatocellular carcinoma progression 5. Disease relevance: IGFBP3 promoter methylation occurs in 63.8% of colorectal cancers and associates with lymph-node metastasis and poor survival 6. Specific polymorphisms (rs2854746) increase colorectal cancer susceptibility 7. In melanoma, epigenetic IGFBP3 repression by Snail2-HDAC3 complex promotes metastasis via PI3K-AKT pathway dysregulation 8. Clinical significance: IGFBP3 promoter methylation status serves as a prognostic biomarker, particularly in stage II colorectal cancer, with unmethylated status conferring improved survival outcomes.

Sources cited
1
IGFBP3 regulates IGF1/IGF2 availability and mediates apoptosis through transcription factor interactions including RXRA
PMID: 10874028
2
IGFBP3 acts via LRP-1/alpha2M receptor to mediate cell growth inhibition independent of IGF1
PMID: 9252371
3
IGFBP3 induces serine-specific dephosphorylation of IRS1/IRS2 leading to inhibitory signaling cascades
PMID: 15371331
4
IGFBP3 regulates mitophagy and mitochondrial quality control through mTOR signaling in epithelial cells under hyperosmolar stress
PMID: 37690686
5
IGFBP3 suppresses hepatocellular carcinoma progression by stabilizing PPAR-γ through deubiquitination
PMID: 39471694
6
IGFBP3 promoter methylation occurs in 63.8% of colorectal cancers and associates with lymph-node metastasis and reduced overall survival
PMID: 32929656
7
IGFBP3 rs2854746 C>G polymorphism increases colorectal cancer susceptibility
PMID: 30334445
8
Snail2-HDAC3 complex epigenetically suppresses IGFBP3 expression to promote melanoma metastasis via PI3K-AKT pathway
PMID: 39864688
Disease Associationsⓘ20
Abnormality of the skeletal systemOpen Targets
0.48Moderate
lymphatic system diseaseOpen Targets
0.39Weak
Alzheimer diseaseOpen Targets
0.37Weak
cancerOpen Targets
0.37Weak
prostate cancerOpen Targets
0.37Weak
colorectal cancerOpen Targets
0.36Weak
open-angle glaucomaOpen Targets
0.35Weak
hypertensionOpen Targets
0.35Weak
Back painOpen Targets
0.34Weak
heart diseaseOpen Targets
0.33Weak
tenosynovitisOpen Targets
0.32Weak
cataractOpen Targets
0.32Weak
hypospadiasOpen Targets
0.29Weak
vertebral joint diseaseOpen Targets
0.27Weak
glaucomaOpen Targets
0.27Weak
Age-related cataractOpen Targets
0.25Weak
senile cataractOpen Targets
0.25Weak
Epidermal Inclusion CystOpen Targets
0.19Weak
lens diseaseOpen Targets
0.19Weak
migraine disorderOpen Targets
0.18Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SFPQProtein interaction100%RXRAProtein interaction100%PRKDCProtein interaction100%INSProtein interaction98%IGF1RProtein interaction98%PAPPAProtein interaction98%
Tissue Expression6 tissues
Liver
100%
Ovary
47%
Heart
33%
Lung
8%
Brain
7%
Bone Marrow
0%
Gene Interaction Network
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IGFBP3SFPQRXRAPRKDCINSIGF1RPAPPA
PROTEIN STRUCTURE
Preparing viewer…
PDB7WRQ · 3.60 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.87LoF Tolerant
pLIⓘ
0.06Tolerant
Observed/Expected LoF0.50 [0.30–0.87]
RankingsWhere IGFBP3 stands among ~20K protein-coding genes
  • #270of 20,598
    Most Researched757 · top 5%
  • #7,631of 17,882
    Most Constrained (LOEUF)0.87
Genes detectedIGFBP3
Sources retrieved50 papers
Response time—
📄 Sources
50▼
1
Meta-analysis of the association of IGFBP3 and IGF1 polymorphisms with susceptibility to colorectal cancer.
PMID: 30334445
Neoplasma · 2018
1.00
2
Associations of IGFBP3 Gene Polymorphism and Gene Expression with the Risk of Osteonecrosis of the Femoral Head in a Han Population in Northern China.
PMID: 27704894
DNA Cell Biol · 2016
0.94
3
Gene Expression Profiling Identifies Interferon Signalling Molecules and IGFBP3 in Human Degenerative Annulus Fibrosus.
PMID: 26489762
Sci Rep · 2015
0.90
4
IGFBP2 and IGFBP3 protein expressions in human breast cancer: association with hormonal factors and obesity.
PMID: 20103684
Clin Cancer Res · 2010
0.86
5
Serum level of IGFBP3 and IGF1/IGFBP3 molar ratio in addition to PSA and single nucleotide polymorphism in PSA and CYP17 gene may contribute to early diagnostics of prostate cancer.
PMID: 20099974
Neoplasma · 2010
0.84