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4 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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MINDY3
MINDY lysine 48 deubiquitinase 3
Chromosome 10 · 10p13
NCBI Gene: 80013Ensembl: ENSG00000148481.15HGNC: HGNC:23578UniProt: Q9H8M7
32PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Protease
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nucleoplasmnuclear membraneK48-linked deubiquitinase activityprotein bindingneuroendocrine neoplasmAbdominal painpreeclampsiaplacental retention
✦AI Summary

MINDY3 is a K48-linked deubiquitinase that removes lysine-48-conjugated ubiquitin from proteins 1. As a member of the evolutionarily conserved MINDY family of deubiquitinating enzymes (DUBs), MINDY3 contains a structurally distinct catalytic domain with no homology to known DUBs and demonstrates high selectivity for cleaving K48-linked polyubiquitin chains, which typically signal protein degradation 1. The enzyme localizes to the nuclear membrane and nucleoplasm, suggesting roles in nuclear protein regulation [GO annotations]. MINDY3's involvement in proteostasis regulation implicates it in cellular processes requiring protein quality control. Evidence from a cigarette smoke-induced oxidative injury model identified MINDY3 within a five-gene sub-network (including MINDY2, CARD17, CARD18, and CASP1) associated with inflammation and oxidative stress responses 2. While MINDY3 has not been directly characterized for disease association, its structural relation to tumor-suppressor pathways on chromosome 10 and participation in stress-response networks suggests potential relevance to cancer and inflammatory diseases. The specific clinical significance of MINDY3 remains to be fully elucidated.

Sources cited
1
MINDY family are structurally distinct deubiquitinating enzymes highly selective for cleaving K48-linked polyubiquitin chains
PMID: 27292798
2
MINDY3 identified in a gene sub-network associated with oxidative stress and inflammatory responses in cigarette smoke-induced injury model
PMID: 41127956
⚠Limited data available — This gene has 2 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
neuroendocrine neoplasmOpen Targets
0.31Weak
Abdominal painOpen Targets
0.27Weak
preeclampsiaOpen Targets
0.26Weak
placental retentionOpen Targets
0.25Weak
obesityOpen Targets
0.25Weak
type 2 diabetes mellitusOpen Targets
0.22Weak
Abruptio PlacentaeOpen Targets
0.19Weak
StrabismusOpen Targets
0.18Weak
overnutritionOpen Targets
0.17Weak
rheumatoid arthritisOpen Targets
0.12Weak
systemic sclerodermaOpen Targets
0.09Suggestive
color vision disorderOpen Targets
0.08Suggestive
cardiac hypertrophyOpen Targets
0.08Suggestive
gastric carcinomaOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.07Suggestive
periodontitisOpen Targets
0.07Suggestive
arthritisOpen Targets
0.05Suggestive
systemic lupus erythematosusOpen Targets
0.04Suggestive
interstitial lung diseaseOpen Targets
0.04Suggestive
synovitisOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
MINDY4BShared pathway100%MINDY4Shared pathway100%TMEM45AProtein interaction87%CARD8Protein interaction81%CARD6Protein interaction81%GHITMProtein interaction80%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
92%
Heart
49%
Ovary
43%
Liver
36%
Lung
32%
Gene Interaction Network
Click a node to explore
MINDY3MINDY4BMINDY4TMEM45ACARD8CARD6GHITM
PROTEIN STRUCTURE
Preparing viewer…
PDB8Q06 · 1.90 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.73LoF Tolerant
pLIⓘ
0.10Tolerant
Observed/Expected LoF0.45 [0.29–0.73]
RankingsWhere MINDY3 stands among ~20K protein-coding genes
  • #11,545of 20,598
    Most Researched32
  • #5,729of 17,882
    Most Constrained (LOEUF)0.73
Genes detectedMINDY3
Sources retrieved4 papers
Response time—
📄 Sources
4
1
Deep eutectic solvent extraction of Tremella fuciformis polysaccharide and the extract's antioxidant activity.
PMID: 41127956
J Sci Food Agric · 2026
1.00
2
CircFAM188A Regulates Autophagy via miR-670-3p and ULK1 in Epithelial Ovarian Carcinoma.
PMID: 39229655
Cancer Rep (Hoboken) · 2024
0.75
3
C10ORF97 is a novel tumor-suppressor gene of non-small-cell lung cancer and a functional variant of this gene increases the risk of non-small-cell lung cancer.
PMID: 21499297
Oncogene · 2011
0.50
4
MINDY-1 Is a Member of an Evolutionarily Conserved and Structurally Distinct New Family of Deubiquitinating Enzymes.
PMID: 27292798
Mol Cell · 2016
0.25