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8 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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NCKAP5L
NCK associated protein 5 like
Chromosome 12 · 12q13.12
NCBI Gene: 57701Ensembl: ENSG00000167566.18HGNC: HGNC:29321UniProt: Q9HCH0
45PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingmicrotubule bundle formationmicrotubule depolymerizationmicrotubule plus-endneurodegenerative diseasebasal cell carcinomaskin cancernon-melanoma skin carcinoma
✦AI Summary

NCKAP5L (also known as Cep169) is a centrosomal protein that regulates microtubule organization and stability through multiple mechanisms. The protein functions as a microtubule plus-end tracking protein (+TIP) that directly binds microtubules via its C-terminal domain and forms homodimers through its N-terminal domain, both of which are required for its biological activity 1. NCKAP5L stabilizes microtubules by promoting their acetylation and facilitates bundling and crosslinking of adjacent microtubules 12. The protein interacts with CDK5RAP2 at centrosomes and EB1 at microtubule plus-ends, positioning it as a key regulator of microtubule dynamics 2. During mitosis, Cdk1-mediated phosphorylation of NCKAP5L at consensus sites triggers its dissociation from centrosomes, potentially regulating mitotic spindle dynamics 3. Clinically, NCKAP5L demonstrates significant disease relevance. The gene is upregulated across multiple cancer types and serves as a promising biomarker for cancer diagnosis and prognosis, particularly colorectal cancer, with high expression correlating with patient survival and immune cell infiltration 4. Additionally, homozygous recessive mutations in NCKAP5L have been identified in autism cases, suggesting a role in neuronal function 5. NCKAP5L also appears as a candidate gene for cold climate adaptation in domestic mammals through cytoskeleton-related pathways 6.

Sources cited
1
NCKAP5L/Cep169 stabilizes microtubules through acetylation and promotes microtubule bundling via homodimer formation and C-terminal microtubule binding
PMID: 26482847
2
NCKAP5L/Cep169 is a microtubule plus-end tracking protein that interacts with CDK5RAP2 and EB1, regulating microtubule stability and bundling
PMID: 26485573
3
Cdk1-mediated phosphorylation causes NCKAP5L/Cep169 dissociation from centrosomes during mitosis
PMID: 26549230
4
NCKAP5L is upregulated in multiple cancer types including colorectal cancer and serves as a biomarker for diagnosis and prognosis
PMID: 38192666
5
Homozygous mutations in NCKAP5L are associated with autism and implicate the gene in cytoskeletal organization and neuronal function
PMID: 22511880
6
NCKAP5L is identified as a candidate gene for cold climate adaptation in domestic mammals through cytoskeleton disassembly pathways
PMID: 37867610
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.54Moderate
basal cell carcinomaOpen Targets
0.31Weak
skin cancerOpen Targets
0.31Weak
non-melanoma skin carcinomaOpen Targets
0.30Weak
sign or symptomOpen Targets
0.30Weak
rheumatic diseaseOpen Targets
0.28Weak
Abnormality of the skeletal systemOpen Targets
0.27Weak
cancerOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.07Suggestive
diabetic neuropathyOpen Targets
0.06Suggestive
skin diseaseOpen Targets
0.05Suggestive
type 2 diabetes mellitusOpen Targets
0.04Suggestive
obesityOpen Targets
0.04Suggestive
colorectal cancerOpen Targets
0.03Suggestive
smoking behaviorOpen Targets
0.03Suggestive
metabolic syndromeOpen Targets
0.03Suggestive
aortic diseaseOpen Targets
0.03Suggestive
diabetes mellitusOpen Targets
0.03Suggestive
goutOpen Targets
0.02Suggestive
adrenal cortex carcinomaOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
NCKAP5Shared pathway100%CDK5RAP2Protein interaction79%CCSER2Shared pathway50%TTLL13Shared pathway33%TTLL6Shared pathway25%STMND1Shared pathway25%
Tissue Expression6 tissues
Lung
100%
Ovary
89%
Heart
74%
Liver
66%
Brain
32%
Bone Marrow
23%
Gene Interaction Network
Click a node to explore
NCKAP5LNCKAP5CDK5RAP2CCSER2TTLL13TTLL6STMND1
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q9HCH0
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.78LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.62 [0.50–0.78]
RankingsWhere NCKAP5L stands among ~20K protein-coding genes
  • #9,488of 20,598
    Most Researched45
  • #6,328of 17,882
    Most Constrained (LOEUF)0.78
Genes detectedNCKAP5L
Sources retrieved8 papers
Response time—
📄 Sources
8▼
1
Multi‑dimensional analysis reveals NCKAP5L is a promising biomarker for the diagnosis and prognosis of human cancers, especially colorectal cancer.
PMID: 38192666
Oncol Lett · 2024
1.00
2
Candidate genes for domestication and resistance to cold climate according to whole genome sequencing data of Russian cattle and sheep breeds.
PMID: 37867610
Vavilovskii Zhurnal Genet Selektsii · 2023
0.88
3
Whole-exome sequencing and homozygosity analysis implicate depolarization-regulated neuronal genes in autism.
PMID: 22511880
PLoS Genet · 2012
0.75
4
Identifying candidate genes for Type 2 Diabetes Mellitus and obesity through gene expression profiling in multiple tissues or cells.
PMID: 24455749
J Diabetes Res · 2013
0.63
5
Microtubule-bundling activity of the centrosomal protein, Cep169, and its binding to microtubules.
PMID: 26482847
Biochem Biophys Res Commun · 2015
0.50